| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1314 |
|---|
| Symbol | |
|---|
| ID | 3922858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1498914 |
|---|
| End bp | 1500056 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637896951 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_502773 |
|---|
| Protein GI | 88602595 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0394754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TAGATAAAAA AACATGTTCT CATGTTACAC GTATCAGACC ATCATTATGC
ATTCTTTTGA TCCTTTTCCT CACTGTCTGC ATGGTTAGCT CAGCTGACAC AAACAGCGGA
GATACTGGCA GTGTAACGAT AACAGATGAC TGGGGAAGAG AAGTTATCCT TGACCATCCC
GCTGAACGAA TTGTCTTTGG CCATACCGCT GCAGGTGAAG GAATTCTTCT CGCTGGTGGC
TGGGATAAAG TAGTCGGAAG GGACGCTTCA ATCACGAACT ACAAATTTTA TCCAAATCTT
GATTCACTTC CGGTAATAAA CGGGCTGAAT CAGGCATTTA CCCTGGATTT CGAAAAAATT
ACTGAGTTAG AGCCGGACCT CGTAATTCTC CAAAAGAAAT ACTCAGACCG GGAAAACTTT
GATGTAATTG CTGAAACACT GGCACCGGAC ATTCCGGTTG TGGGTCTTGA TTTCCTTGAT
CCGGAATCTG CTGATAGTAT TCAAAAGTTA GGCGTTCTCC TTGGAACAAG TGATGTTGCT
GATGAATATG TCAGATTTCA TGATGATACC ATCACAAGCA TTCGGGAAAA AACAAGTTCA
CTTCCAGATA CTGAAAAGCC ACATGTATTT ATCGATGCAG TCGGAATGGG TCCAGAACAG
ATTTCAACCT ACGGAAAAGA GGCTTCGTTC TGGAATAAGA TATGTGACAT TGCTGGAGCA
AAGAACGTAG CACAGGATTT ACCTTCGGAT TTTGTAAAAA CAGTAGATCT GGAATGGCTG
CTTGAACAGG ATATTGACAG TATTGTTGTT CAGGTGTGGG ACAAAGAAAA GCCGGAATAT
GTTGGCTATA CCGCAACACA GCCCGCAAAG GCAACTGAGG AAGCAGAGGT TATTATTCAG
GAAATTTCAG AAAAAGATAT ATATTCACAT ACCGACGCAG TTCAGAACGG ACAAGTATTT
GTCCAGGACT ATCAACTAGC AAATAACCCG AAATCTTTCA TTGGAGTTGT GTACCTGGCC
AAATGGATCC ATCCGGACCT GTTTGCAGAC ATTAATCCTG AGCAGATTCA CCAGGAATAC
CTGAAGAAGT TTATTGGAAC AGACCTTGAT TTGAATAATG CCGGGATATT TGGGTATCCC
TGA
|
|---|
| Protein sequence | MKILDKKTCS HVTRIRPSLC ILLILFLTVC MVSSADTNSG DTGSVTITDD WGREVILDHP
AERIVFGHTA AGEGILLAGG WDKVVGRDAS ITNYKFYPNL DSLPVINGLN QAFTLDFEKI
TELEPDLVIL QKKYSDRENF DVIAETLAPD IPVVGLDFLD PESADSIQKL GVLLGTSDVA
DEYVRFHDDT ITSIREKTSS LPDTEKPHVF IDAVGMGPEQ ISTYGKEASF WNKICDIAGA
KNVAQDLPSD FVKTVDLEWL LEQDIDSIVV QVWDKEKPEY VGYTATQPAK ATEEAEVIIQ
EISEKDIYSH TDAVQNGQVF VQDYQLANNP KSFIGVVYLA KWIHPDLFAD INPEQIHQEY
LKKFIGTDLD LNNAGIFGYP
|
|---|
| |