Gene Mhun_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1289 
Symbol 
ID3924970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1460122 
End bp1462719 
Gene Length2598 bp 
Protein Length865 aa 
Translation table11 
GC content47% 
IMG OID637896929 
ProductATPase AAA-2 
Protein accessionYP_502751 
Protein GI88602573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00235636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.153454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGA ACTTCAACAA TTTTACACTC AAATCACAGG AAGCAATTCA GAAAGCGATG 
GATATCGCTG CTGGTAAACA GAACCAGGCG ATAGAACCTG CTCATATTCT CAAAGGGATG
CTTATTGTAG ATGAGAATGT CATCCCCTAC CTCCTCAAAA AACTCAATGT CAATCTTGAC
CGGTTAAACC AGGTTCTGGA TCGAAATATT GAGGCATTAC CAAAAATTAC TGGAGGGGAA
CAGTACCTTT CACACGATTC ATCAAAAGCC CTCCAGAAAG CGAGTGGATA TGCCCAGGAA
TTGAAGGATG ATTTCGTCTC GATTGAACAT CTCCTTCTCG GTATTCTCTC GGTGAATGAG
CCAACTTCGC GACTGCTCAA AGAATTTGGC GTGACTGAAA AGGATCTGAA AGAGGCTATC
CGAATTTTGA GGAAAGGGTC CACAGTTAGC AGCCAGACTG CAGAAGAGAC CTATAATGCC
TTAAATCAGT TTGCACGGAA TCTGAATGAA CTTGCATTCT CCGGAAAACT TGATCCGGTC
ATTGGCCGGG ATGATGAGAT CAGAAGGGTC TTACAGATCC TATCACGGAG AACAAAGAAT
AATCCGATAC TGATCGGTGA GCCTGGTGTT GGAAAGACTG CAATTGCAGA AGGTCTTGCA
CACCGGATTA TTGACGGTGA TGTTCCTGAT AACCTGAAGA CGAAGCAGAT CTTCTCCCTT
GACATGGGTG CCCTGATTGC AGGAGCGAAA TACAAGGGAG AATTTGAGGA ACGACTCAAG
AGTGTGGTAA AAGAGGTTGT CTCATCAGAC GGCGAAATCA TCCTCTTCAT TGATGAGATT
CATACCCTTG TCGGTGCCGG GGCTGGTGAA GGGGCAATGG ATGCCGCCAA TATCTTAAAG
CCCGCTCTTT CCAGGGGAGA ACTGCATGTC ATTGGTGCAA CGACCTTAAA GGAATACCAG
AAGTACTTTG AGAAAGATAA GGCCTTGGAA CGACGGTTCC AGCCGGTGAT GGTAAACGAG
CCTGATACCC TGGATGCGAT ATCCATCCTC CGTGGTATCA AGGAAAAATA CGAGACACAT
CATCATGTCC GGATCAAGGA TGAAGCCATA ATTGCAGCCG TTGAACTCTC GCAGCGGTAT
ATCTCCGACC GGTTCCTCCC TGACAAGGCG ATTGACCTGA TCGATGAAGC AGCGTCAAAA
CTCCGGCTTG AGATAAACTC CGTTCCTGAA GAACTTGAGA TAATTGAGCG GAAGATCAGG
CAACTGGAGA TAGAGCGGGA AGCCATTAAA CGGGAAAAGG ATCAGGTTAA ACTTGATGCT
CTCAATGAGG AGATTGGAAA TCTTACCGAG GAGCGGAACC GGCTGAAGGC AAAATGGCAG
TCAGAGAAGG ATATTGTCGA ACAGATACAG TTGCTGAAAA ATCAGATAGA AGATCTCAAA
TTTGAGGCAG AAAGTGCCAA CCGGGCCGGA GACCTCGGAA AGGTTGCTGA GATCAGATAT
GGCCGGATCC CTGAGAAAGA AAAGATCATC GAGGGTCTGA AGCAACAACT GACCGACCTG
CAGAAAGATT CGGCCATGGT CAATGAAGAG GTGGATGCAG AAGAGATAGC CGAAGTGGTT
TCCAGGTGGA CCGGCATTCC GGTTAGCAGG ATGCTGCAGA GTGAGAAACA AAAACTCCTC
ACCCTGGAGG CAGAACTTCA TAAGCGTGTT GTCGGTCAGG ATGAAGCTAT CCGGGCGGTA
TCTGATGCCA TACGCCGGAG CCGTGCAGGT CTGTCAGATT CAAAGCGGCC AATCGGATCA
TTCATCTTCC TCGGAACAAC CGGTGTCGGG AAGACAGAAC TAGCTAAAGC CCTTGCAGAA
TTTCTCTTCA ATAATGAGAA CAGCATGGTC AGGATTGATA TGTCCGAGTA CCAGGAACGG
CACACGGTTT CCAGGCTGGT TGGTGCTCCG CCTGGATATG TCGGATATGA GGAATCGGGT
CAGCTGACTG AAGCGGTCCG GAGAAAACCC TACTCTGTGG TATTACTTGA CGAGATAGAG
AAGGCCCATC CGGATGTCTT TAATATCCTG CTTCAGGTTC TGGACGACGG CCGACTGACT
GACAATAAGG GGCGGACGGT AGACTTTAAG AATACCATCA TCATTATGAC CTCAAACATC
GGGTCACATA TCATCCAGGA AAACCTGGAA CATGTCACTG ACAAAAACAG GGAGGAGATC
TATGATCAGA CCAAAGACCT GGTGTTTGAT CTTCTCAAGA AGACGATTCG TCCGGAGTTT
CTGAATCGGA TTGATGAAGT CATCATGTTC AGGCCACTGA CCATGGATGA GATTCGTACG
GTCGTCAAAC TGCAGCTTGA TATCGTCAGG AAGATGCTTG AGAAGAATGA TGTCAGGTTC
ACCGTCACAG AGAAAGCAAT CGGTCATATA GCAAACCTCG GGTTTGATCC CCTGTTCGGA
GCACGTCCCA TCAAACGGGT TATCCAGAGA AACCTGCTCA ATGAACTCTC GAAGATGATA
CTTGCCGGAG AGGTTACGAA AGAGAAAGAG ATCATTGTGG ATGAAAAGGA TGGGTCCCTG
GTATTTCGAA ATACCTGA
 
Protein sequence
MIMNFNNFTL KSQEAIQKAM DIAAGKQNQA IEPAHILKGM LIVDENVIPY LLKKLNVNLD 
RLNQVLDRNI EALPKITGGE QYLSHDSSKA LQKASGYAQE LKDDFVSIEH LLLGILSVNE
PTSRLLKEFG VTEKDLKEAI RILRKGSTVS SQTAEETYNA LNQFARNLNE LAFSGKLDPV
IGRDDEIRRV LQILSRRTKN NPILIGEPGV GKTAIAEGLA HRIIDGDVPD NLKTKQIFSL
DMGALIAGAK YKGEFEERLK SVVKEVVSSD GEIILFIDEI HTLVGAGAGE GAMDAANILK
PALSRGELHV IGATTLKEYQ KYFEKDKALE RRFQPVMVNE PDTLDAISIL RGIKEKYETH
HHVRIKDEAI IAAVELSQRY ISDRFLPDKA IDLIDEAASK LRLEINSVPE ELEIIERKIR
QLEIEREAIK REKDQVKLDA LNEEIGNLTE ERNRLKAKWQ SEKDIVEQIQ LLKNQIEDLK
FEAESANRAG DLGKVAEIRY GRIPEKEKII EGLKQQLTDL QKDSAMVNEE VDAEEIAEVV
SRWTGIPVSR MLQSEKQKLL TLEAELHKRV VGQDEAIRAV SDAIRRSRAG LSDSKRPIGS
FIFLGTTGVG KTELAKALAE FLFNNENSMV RIDMSEYQER HTVSRLVGAP PGYVGYEESG
QLTEAVRRKP YSVVLLDEIE KAHPDVFNIL LQVLDDGRLT DNKGRTVDFK NTIIIMTSNI
GSHIIQENLE HVTDKNREEI YDQTKDLVFD LLKKTIRPEF LNRIDEVIMF RPLTMDEIRT
VVKLQLDIVR KMLEKNDVRF TVTEKAIGHI ANLGFDPLFG ARPIKRVIQR NLLNELSKMI
LAGEVTKEKE IIVDEKDGSL VFRNT