| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1287 |
|---|
| Symbol | |
|---|
| ID | 3924968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1456363 |
|---|
| End bp | 1459170 |
|---|
| Gene Length | 2808 bp |
|---|
| Protein Length | 935 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637896927 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_502749 |
|---|
| Protein GI | 88602571 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0339259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.305866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTC ACGAGATTCC AAAAGAAGGT TCTTCTGATT CTTCAGTTAA TGAGTCCGAA
GAAACGGTGT TTCAAAAAAG CAGTCATTTT ATTGGAAGAT TTAAATTACA AACCGTCCTC
ACCATTAGTT TTGCACTCAT AGTTTTCCTT GCTATCTGTA TCACCGGATT TTTTTCATTT
CAGGCCAGTC AGTTCGCTGT TAATGAACTG GCCGGACAGG TTCAGGGTGA GGTCTCTGAT
CGGATAACCG ATCAATTGAA TGAATATCTC AAAACCCCTC ATCTGGTAAA CCAACTTTGT
CTTGACAGTA TCAGGCTCGG GCATATACAT GTCCATAAAA ATTCCGACCT GATCTCGTAT
TTCAGAGAGT TATCATTTCG ATTTGATACG ATTGAAGCAG TATGCTATGC TAATCAGCAG
GATGGCAATT ATACCATCAT TTCAAAGGTA GGTGCCCCTG GATTGGTAAA CGGAACCGAG
CGGTTTTACG GCGTTTCAAA CTCACTGACA AATCATTCCT TTATAGAGTA CCGCCTGTTA
CCTGATGGAA GTCTAGGGGA AAAGACACTG ACAATACCTG ATTATGATCC CCGGACCAGA
CCGTGGTATC AGGCAGCAGT CAGGGCAGGG GGTCCGGCAT GGACACCGAT TTATATGTGG
CTTGAAGGAG TGGTCAGTAT CGATGCTGTT ACTCCTGCAT ATTCTGATCA GGAAACTCTC
ATAGGAGTCA TGGACACATC CCTGACATTG AGTGGGATTG GAGACTTCCT GCAGCAGATC
AAGATCTCTG AAAACGGGCA GGCGTTCATT ATAGATAAAA ATGGTCAGAT AATTGCAGCT
TCAACCATCA AAGAACCTTA TCATCAGGTT AATGGCGAGC TGGTTCGTCT CTATGCTGCT
GAATGTACTG ATCCGGTCAT TCAGAAAGTG ACGTATTTTA TCAGTCATCA TATGGAAAAT
AGTACCAATA TTTCGACCAG AAAACAATTT ATTTGTGATT TTGAATCGGG TCCGTTGCGT
GTTGAGTTAT CTCCATACCA AGACTCATAT GGGCTTGACT GGCTTATTGT GGTTGTCATT
CCTGAATCTG ATTTCATGGG GAGTATTGAA GCTCACAATA AGACTACCCT GCTGATTTTA
TTAGGTTCCC TTCTTGGAAC AATTATCCTC TGTATTCTCC TTGCACGGTA CATTACCCGT
CCTGTTCTTG CGATGAACAA GTCCGCAAAA GCCCTTGCTG ATGGTGATTT CTCCTCTTGG
ACTGATATTA ACCGAAAAGA CGAACTTGGT GAACTTTCAC ATTCCTTCAA ATTTATGGCT
GATCAGTTAA AGACCATGTT TTCATCGTTG AAAGCCAGTG AAGAGCGATA CATGAGTCTC
TTTCAGGCCT CTGTAGATGC GATCATCCTC TGTAAAGGAT ATACACTTCT TGAGATGAAT
CATGCAGCTG AAGAGATGTT TTCTCTGTCC GGTAACATAG TTTCTGGAAG AGAAATTACT
GGTTTATTCG ATGAAATTGG CAAGACTATT GCCCAGATGA TTGAATCTTC AATGAACGCC
GGTTCGGATG GATATGAAAG CCGAACAATA TCACGAACCA AAGATAATGC TGAGCAATAT
CTGAATATCC GAGTAACCAA GGTCACCGAA GATGGTGACA TCTTAAGTCT GGTCCACATC
CGTGATATCA CCATTGAACG TCAGGCAATC ATCTCTTTTG CAGAAAAGGA AGCTCTTCGT
GATGCCTATT CACGGGTAGA GATGATCCTT GAACTCCTCC CAGATCCTAC CTTTGTCATC
GATAAGAATG GGGTCATTCT CTTCTGGAAC CGTGCAATGG AGAAGTTTAC TGGGTATGAC
TCGGGGTCCA TGATTGGTAA AGGGGATTTC CAATACTCAT ATGCAATATA TTCAGAGAAA
AGGCCCCTGC TCATAGACTA TGCATTACAT CCTGAGTTAT CTTATGATGG TTTATACCCG
GCAATCAACA GGTCTGAAGA TCTGTTATCA ACAAGTCTTT GGGTTGAAAT TAAGGGAAAG
ATGGCATATA TTTCTGTTAT CGCTGCCCCT TTGTATGATA AGAATGGGAA TGTTGTCGGT
GCAATAGAGT CGGTAAGAGA TATCACCTCT CATAAGCAGG CAGAAGAAGC ACTACTGGTT
GCAAATAAAA AGTTAAACCT TTTATCCGGA ATTACCCGGC ACGATATCCT GAATAAGATT
ATGATCTCAA AAGCATTCCT ATCCTTCCTG GATGATAATG AGTTACACCA GGAACAGAAG
GACTATATTG ATCGTATTAG GCGCTCATTG ACTGAAATTG AACAATTTGT TGCCTTTTCA
AAGACATACC AGGAACTCGG ACTGAAATTA CCTGAGTGGC AGGATATCGG AGAGGTGTTC
AGACGGGTTG CTCACCAGAT TGATACGGGA GACGTGCAGG TTCGTGTGAA TGTAGCCGGG
GTTTCAATTT TATGTGATCC CCTTTTTGAG AAGGTCTGCT ATAATCTTAT TGAAAATGCA
ATCCGTCATG GGGGAGATCT GACATATATT GAAGTTCGTG GAACCGAGAC CAGTACCGGT
TTTCTTATCA CGGTAGAGGA TGATGGAACC GGGATTTTGG ATGATCAGAA AAAGTATATC
TTTGAAAGAG GTTTTGGTAA GAATACCGGA TATGGTCTGT TTCTGACACG AGAGATCCTT
GCAATGTCTG ATATTACAAT TATCGAAAAT GGACAGTATG GTACAGGATG CCGGTTTGAG
ATCGATGTTC CCAAAGGTAA ATACAGAAAA GATAGTAAGA TGGGTTAG
|
|---|
| Protein sequence | MNSHEIPKEG SSDSSVNESE ETVFQKSSHF IGRFKLQTVL TISFALIVFL AICITGFFSF
QASQFAVNEL AGQVQGEVSD RITDQLNEYL KTPHLVNQLC LDSIRLGHIH VHKNSDLISY
FRELSFRFDT IEAVCYANQQ DGNYTIISKV GAPGLVNGTE RFYGVSNSLT NHSFIEYRLL
PDGSLGEKTL TIPDYDPRTR PWYQAAVRAG GPAWTPIYMW LEGVVSIDAV TPAYSDQETL
IGVMDTSLTL SGIGDFLQQI KISENGQAFI IDKNGQIIAA STIKEPYHQV NGELVRLYAA
ECTDPVIQKV TYFISHHMEN STNISTRKQF ICDFESGPLR VELSPYQDSY GLDWLIVVVI
PESDFMGSIE AHNKTTLLIL LGSLLGTIIL CILLARYITR PVLAMNKSAK ALADGDFSSW
TDINRKDELG ELSHSFKFMA DQLKTMFSSL KASEERYMSL FQASVDAIIL CKGYTLLEMN
HAAEEMFSLS GNIVSGREIT GLFDEIGKTI AQMIESSMNA GSDGYESRTI SRTKDNAEQY
LNIRVTKVTE DGDILSLVHI RDITIERQAI ISFAEKEALR DAYSRVEMIL ELLPDPTFVI
DKNGVILFWN RAMEKFTGYD SGSMIGKGDF QYSYAIYSEK RPLLIDYALH PELSYDGLYP
AINRSEDLLS TSLWVEIKGK MAYISVIAAP LYDKNGNVVG AIESVRDITS HKQAEEALLV
ANKKLNLLSG ITRHDILNKI MISKAFLSFL DDNELHQEQK DYIDRIRRSL TEIEQFVAFS
KTYQELGLKL PEWQDIGEVF RRVAHQIDTG DVQVRVNVAG VSILCDPLFE KVCYNLIENA
IRHGGDLTYI EVRGTETSTG FLITVEDDGT GILDDQKKYI FERGFGKNTG YGLFLTREIL
AMSDITIIEN GQYGTGCRFE IDVPKGKYRK DSKMG
|
|---|
| |