| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1275 |
|---|
| Symbol | |
|---|
| ID | 3924996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1448265 |
|---|
| End bp | 1449077 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637896915 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_502737 |
|---|
| Protein GI | 88602559 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.593332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCT TCGGATCCGT GAACCGGATG GTTACCATCA CCATTAATAA AAATCAGTAT
TTGGCTGAAG AGGGAGAGAT ATTCCTTCTC ACCGCTTTGA GGCTGAATAT TGACATCCCT
CACCTCTGCT ATGAAAAAGC CCTGGAACCA TATGGTGCCT GTCGTCTTTG TATGGTTGAT
GTGGTCACCT GTGGAAAGAC AACAATGACT CCCGCATGCA CCATCAAAGT TCACAATGGC
CTTGAAATCC TGACCGACAC TCCGGAGATC ATAAAACACC GACGCCTGCT CTTTGAACTC
TACCTTGCAG AAGCACCAAA ATCAGAGGTA ATCAGGGAGA TGGCAGCGAA ATACGGAGTC
ACAAAGACGC GGTTTCTCAA GAAGATTGTT CATGATGACC CGCTATTCGG AAAATGCATA
TTATGTGGAT TATGTGTCCG GGTGTGTAAT GAAATCATGG GCACAAGTGC CATTAATTTC
ATAAACCGGG GGCCATACAC GGTTATCAAT ACGCCGTTTT TTGAACACAA TCCGGACTGT
GCAGGGTGTG CTGCCTGTGC TCAGGTATGT CCGACGAAAG CGATAGTGTT TGAAGATAGT
GATGCAGAAC GGATCATGCA ATCATGGTCC GGAACAGCCG TCCCTCTTGC AACATGTTCA
TCATGCAAGA AGTCATATGC ACCGGAGAAA CTCATGGACA AGGTGCTGGA CAAACTCGAC
CCTGCAATTA TCGAAGAGCT ACGAACCCTG TGCCCTGAAT GCAGGCGCAA ATACATCACC
AGAATGGAGA TCGGGAGAAT CCCAAGGTCA TAA
|
|---|
| Protein sequence | MSLFGSVNRM VTITINKNQY LAEEGEIFLL TALRLNIDIP HLCYEKALEP YGACRLCMVD
VVTCGKTTMT PACTIKVHNG LEILTDTPEI IKHRRLLFEL YLAEAPKSEV IREMAAKYGV
TKTRFLKKIV HDDPLFGKCI LCGLCVRVCN EIMGTSAINF INRGPYTVIN TPFFEHNPDC
AGCAACAQVC PTKAIVFEDS DAERIMQSWS GTAVPLATCS SCKKSYAPEK LMDKVLDKLD
PAIIEELRTL CPECRRKYIT RMEIGRIPRS
|
|---|
| |