Gene Mhun_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1258 
Symbol 
ID3925213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1430294 
End bp1431013 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID637896899 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_502721 
Protein GI88602543 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000106472 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG ACGCATTTAC TGCACTCAGG CAGGGTGAGA TGGTCCTGCT GTATGACTTT 
GATGACCGTG AACGAGAGAC CGATTTTGCC ATGCGGTCTG ATATGATAAC TCCCCGCGAC
ATCTGCCGGA TGCGAAATGA TGCCGGCGGA CTTATCTGCA CGGCAATACC CTTCCAGGCA
GCTAAGAAAC TAGGTCTTCC ATTTGCCCGT GAAGTCCTCC GAAACTGTGC CATGGTTGAA
AAACTGGGAG ATATCCCCTA TGATCCGTCC AATAATTCCT CGTTCTCGCT CTGGGTCAAC
CATAGGGATA CCTTCACCGG GATTACCGAC CGGGACCGGA CGAAAACTGT AAATGCACTT
GCTGAAGTAG TTCAGGCAGT CATGAATGGA GAGCCTTCAT CATTCAAGGA ACATTTCAGA
ACTCCGGGTC ATATGCCGGT TCTCATCGCG GCTGAACATC TCTTGTCCCA GCGTCATGGT
CAGACCGAAC TGTCGATTGC CATGGCAGAG ATGTCTGGTA TTATCCCAAG TATCACCATC
TGCGAAATGC TTGATGATGA TTCAGGATAT GCTCTCTCTA AAGAAGATGC AATACGATAT
GCAAAACGTC ATGACCTTGC GTTCATAGAG GGTTCAGAGG TTCTGGACCG GTGGGAAAAG
GTGGCATATC CAAAACCACA ATGCACCGGA CCAGTAACAG CAGCAGTAAA CCGTATTTAA
 
Protein sequence
MTKDAFTALR QGEMVLLYDF DDRERETDFA MRSDMITPRD ICRMRNDAGG LICTAIPFQA 
AKKLGLPFAR EVLRNCAMVE KLGDIPYDPS NNSSFSLWVN HRDTFTGITD RDRTKTVNAL
AEVVQAVMNG EPSSFKEHFR TPGHMPVLIA AEHLLSQRHG QTELSIAMAE MSGIIPSITI
CEMLDDDSGY ALSKEDAIRY AKRHDLAFIE GSEVLDRWEK VAYPKPQCTG PVTAAVNRI