Gene Mhun_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1253 
Symbol 
ID3924195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand- 
Start bp1425426 
End bp1427123 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content49% 
IMG OID637896894 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_502716 
Protein GI88602538 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0348661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.248456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCGG TAATTACATA TTCGCGGAAT GTTTTTGTGC CACTCACCTT TGTCTGCAGA 
AATATCTGCG GGTACTGTAT ATTCCGTCGC CCGCCTGGAG AAGGTTGTGT TCTTTCACCT 
GACGAGGTCA TACGGGTACT GAGGCGCGGG GCAGAGGCCG GATGCACAGA GGCCCTCTTT 
ACCTTTGGTG AGCATCCTGA AGAGGTGGCA GGTTTTATGC CTTTCCTTGA GCAGTATGGT 
TTCGGTTCGA TCCTGGAATA CTGTCATGCA ATGGCAGAAG AGGCGCTCCG TCTCGGTCTT 
CTTCCGCATA CCAATGCCGG GATCATGACT GCTGACGAGA TGAGCTACCT TGCTGATGTC 
AATGCCAGTA TGGGACTTAT GCTTGAGACC ACCGCCGACA TCCCAGCGCA CCGGAACTGC 
CCGGGGAAAG AACCTGCACG GCGTATCGCC ATGATTGAGG ATGCCGGCAG ACTTAAAATA 
CCGTTCACTA CCGGCATTTT ACTTGGAATT GGTGAAACCC GGTCAGACCG GCGGGAATCA 
TTAGAGGTAA TCGCCGGTCT TCACCGAAAA TATGGCCATA TCCAGGAGAT CATCATTCAG 
AACTTCTGCC CAAAGCCAGG TACTGATATG AGTGCATTTC CTGGAGCAAC CCTTCGTGAT 
ATGCAGGAGA CGGTCCGGAT GGCGAAAGAG ATCCTTCCTT CTGATATTGC CATTCAAATC 
CCTCCAAATC TTGCCGACGC TGCACAAATC CTCCCTTGTG GGGTAACAGA CCTTGGTGGC 
ATCTCCCCGG TGACGATTGA CTATGTAAAT CCTGAGCATC CCTGGCCGGC TTTTGATGAA 
CTTGCGGCCT TAACGAAAGG GTACACGCTT AAAGAACGGC TCTGTATTTA TCCTGAATAT 
ATACGGAGAG GGTGGTATCA CCCACGGCTC AGGGATTGTA TCATCAGCCT TGAGAACACA 
ATACATATGA GAGGTACATC CGTGATACCG GCAAAACCCC TGTATGAGGG GAAAGCAAAA 
TCAGTTTATG CCAGTGAGAA TCCTGATGAA CTGATTGTTG TCTTTCGAAA TGATATGACC 
GCCTTTAACG GGGTCAAGCA TGACCAGTTT ACTGACAAGG GAAGACTTAA TGCAACGGCG 
TCGGAATTCT TCATGAAGAT GCTTGAGGCC GAAGGAATTC CAACTCATCA TATCCGGATG 
TCTGCACCTG ATACTATGAT CGTCCGTCGA CTGGAGATGA TCCCGCTTGA GGTCATTGTC 
CGGAATGTTG CTGCCGGTTC CATGACCAAG AAATATCCGG TTAAGGAAGG AATGGTGCTG 
GATCGCCCGG TGGTCACTAT TGATTATAAA GATGATGAGC GCGGCGATCC AATGATCAAT 
GATGATCTTA TTGAGGTTCT GCACATTCTG ACTGCTGATG AACTCCGAAA GGTTAAGGAG 
ATGGCCTTAC ATGTAAACAA GGTCCTTACC CGGTTCTTTG ATGAGTGTGG TATCAGACTT 
GTCGACTTTA AGCTTGAGTT TGGAAAGGCA GACGGCACTA TCTACCTTGG TGATGAGATC 
AGCATGGATT CCATGCGGCT TTGGGACAAA AAAACCGGAG AGTCATTTGA TAAGGATGTG 
TACCGGTTTG ACAAGGGCGA TGTCATTGCC GCGTACCGGA ATGTTCTCAA ACGGATAATT 
CCGGATTCCG GAGTATAA
 
Protein sequence
MSPVITYSRN VFVPLTFVCR NICGYCIFRR PPGEGCVLSP DEVIRVLRRG AEAGCTEALF 
TFGEHPEEVA GFMPFLEQYG FGSILEYCHA MAEEALRLGL LPHTNAGIMT ADEMSYLADV 
NASMGLMLET TADIPAHRNC PGKEPARRIA MIEDAGRLKI PFTTGILLGI GETRSDRRES 
LEVIAGLHRK YGHIQEIIIQ NFCPKPGTDM SAFPGATLRD MQETVRMAKE ILPSDIAIQI 
PPNLADAAQI LPCGVTDLGG ISPVTIDYVN PEHPWPAFDE LAALTKGYTL KERLCIYPEY 
IRRGWYHPRL RDCIISLENT IHMRGTSVIP AKPLYEGKAK SVYASENPDE LIVVFRNDMT 
AFNGVKHDQF TDKGRLNATA SEFFMKMLEA EGIPTHHIRM SAPDTMIVRR LEMIPLEVIV 
RNVAAGSMTK KYPVKEGMVL DRPVVTIDYK DDERGDPMIN DDLIEVLHIL TADELRKVKE 
MALHVNKVLT RFFDECGIRL VDFKLEFGKA DGTIYLGDEI SMDSMRLWDK KTGESFDKDV 
YRFDKGDVIA AYRNVLKRII PDSGV