| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1223 |
|---|
| Symbol | |
|---|
| ID | 3922809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1394376 |
|---|
| End bp | 1395395 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637896866 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_502688 |
|---|
| Protein GI | 88602510 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0862091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAAG ATAACTCCCG TGCTGCAATA GATGAGACTG CCAAGTTCTT ATTTAATGCA
CCAGATCATG CAATAATCGA TTTTATCAGC CGGATTTTTT CGATTCACAT AGACAAAGCA
ACTGCAGAAA TCACCCGTGC CTCTTCAGAA TACATATCCC ACCCTGGCTT TTCCCGCCAT
CTCCCCGACA TCGTCCTTGC CGTGCATGAC AAAACCGTTC CTGATCCCCT CTTTCACATC
GAAATCCAGA CTGAACATGA CGGGATGATG GATCTTCGAA TGGTGAAATA CGGATACCTC
ATCGGTGCGT CACGGTCACA GATGGATGAG GATGATACCC GGATTATCTC AATCCCACAT
CAGGTTGTGA TATACCTTGA GGAGCATAGG AGGATACGTG ATGAACTGAA AGTAAAGATC
ATTTTTCCCG ATGAATCTGA AGTAGATTAT ATTGTTCCGG TTTTCAGGTT GTATGCATAC
TCAGCATATG AACTTAGCGA AATGGATCTC TATCTGGTAA TTCCGCTGAT ACTTGTGAAG
TACAGAAAGA GGTTTGATAT AATCTGCAGA CGGAAAAACC TGAACCAGGA AGAGTTTGAT
GCACTTGTTC AGGATGTATT GCAGGACATT GAACAGATCA CCACAATTAC AGGAAGGTAT
GAAGAAAAAG GTGTAATGGA TGAGAAAACA AAGGATATTA TTCTCTCAGC GACAATTGAG
TTATATACAC AGTTGCATCA GAAATATATC CGTGATAGGA AGAGTAAGGA GAGGGTGGAG
AATATGATAG AAAGCGTCAC ACAGAAGATT AGTAAAAAAT GGCATATGAT CGGGATTGAG
GAGGGAAGGC AGGAAGGAAG ACAAGAAGGA AGACAAGAAG GAAAACGTGA AGGTATTGCC
GAAGGTGTTA AGATCGTAGC AAAAAATCTG TTAATGATCG GAACCTCAGA TGAAGTAATT
CTGAAAGCCA CAGGCCTTAC TCCAGATGAG CTCGATACTA TCAAACGGGA AGCGTTGTAA
|
|---|
| Protein sequence | MSKDNSRAAI DETAKFLFNA PDHAIIDFIS RIFSIHIDKA TAEITRASSE YISHPGFSRH
LPDIVLAVHD KTVPDPLFHI EIQTEHDGMM DLRMVKYGYL IGASRSQMDE DDTRIISIPH
QVVIYLEEHR RIRDELKVKI IFPDESEVDY IVPVFRLYAY SAYELSEMDL YLVIPLILVK
YRKRFDIICR RKNLNQEEFD ALVQDVLQDI EQITTITGRY EEKGVMDEKT KDIILSATIE
LYTQLHQKYI RDRKSKERVE NMIESVTQKI SKKWHMIGIE EGRQEGRQEG RQEGKREGIA
EGVKIVAKNL LMIGTSDEVI LKATGLTPDE LDTIKREAL
|
|---|
| |