| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1222 |
|---|
| Symbol | |
|---|
| ID | 3922808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1393278 |
|---|
| End bp | 1394261 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637896865 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_502687 |
|---|
| Protein GI | 88602509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.812835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0823842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCAAG ATAACTCCCG TGCTGCAATA GATGAGACTG CCAAATTCTT ATTTGATGCA
CCAGATCATG CAATAATCGA TTTTATCAGC AGGATTTTTT CGATTCACAT AGACAAAGCA
ACTGCAGAAA TCACCCGTGT CTCTTCAGAA TACATCTCTC ACCCTGGCTT TTCCCGCCAT
CTCCCCGACA TCGTCCTTGC CGTGCATGAC AAAACCGGTC CTGATCCCCT CTTTCACATC
GAAATCCAGA CTGAACATGA CGGGATGATG GATCTCCGAA TGGTGAAATA CGGATACCTC
ATCGGTGCGT CACGGTCAGA GATGGATGAT AATGATACCC GGATTATCTC AATCCCACAT
CAGGTTGTGA TATACCTTGA GGAGCATAAG CGGATACGTG ATGAACTGAA AGTAAAGATC
ATTTTCCCTG ATGAATCTGA AGTAGATTAT ATTGTTCCGG TTTTCAGGTT GTATGCATAC
TCAGCATATG AACTTAGCGA AATGGATCTC TATCTGGTAA TTCCGCTGGT TCTGGTAAAG
TACAGAAAGA GGTTTGATAT AATCTGCAGA CGGAAAAACC TGAACCAGGA AGAGTTTGAT
GCACTTGTTC AGGATGTATT GCAGGACATT GAACAGATCA CAACAATTAC AGGAACGTAT
GAAGAAAATG GTGTAATGGA TGAGAAAACA AAGGATATTA TTCTCTCAGC GACAATTGAG
TTATATACAC AGCTGCATCA GAAATATATC CGTGATAGTA AGAGTAAGGA GAGGGTAGAG
AATATGATAG AGAGCGTCAC ACAGAAGATC AGTAAAAAAT GGCATATGAT CGGGATTAAA
GAAGGAAAAC GTGAAGGTAT TGCCGAAGGT GTTAAGATCG TAGCAAAAAA TCTGTTAATG
ATCGGAACTG CTGATGAAGT AATTCTGAAA GCCACAGGCC TTACTCCAGA TGAGCTCGAT
ACTATCAAAC GGGAAGCGTT GTAA
|
|---|
| Protein sequence | MSQDNSRAAI DETAKFLFDA PDHAIIDFIS RIFSIHIDKA TAEITRVSSE YISHPGFSRH
LPDIVLAVHD KTGPDPLFHI EIQTEHDGMM DLRMVKYGYL IGASRSEMDD NDTRIISIPH
QVVIYLEEHK RIRDELKVKI IFPDESEVDY IVPVFRLYAY SAYELSEMDL YLVIPLVLVK
YRKRFDIICR RKNLNQEEFD ALVQDVLQDI EQITTITGTY EENGVMDEKT KDIILSATIE
LYTQLHQKYI RDSKSKERVE NMIESVTQKI SKKWHMIGIK EGKREGIAEG VKIVAKNLLM
IGTADEVILK ATGLTPDELD TIKREAL
|
|---|
| |