Gene Mhun_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1181 
Symbol 
ID3923383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1343709 
End bp1344764 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content48% 
IMG OID637896823 
ProductV-type ATP synthase subunit C 
Protein accessionYP_502648 
Protein GI88602470 
COG category[C] Energy production and conversion 
COG ID[COG1527] Archaeal/vacuolar-type H+-ATPase subunit C 
TIGRFAM ID[TIGR02923] ATP synthase A1, C subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000792947 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.370579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGA ACAGTGGCGG CCCGGCTCCG TATATCTATG TCAGTACACG GTTACGGGTC 
AGGAAGGCCA AACTGCTCCC CCCTGAAGAA TATCAGCGGA TGCTCAACAT GAGTCTTCCG
GAGATTATTC GTCTGATTGG AGAGACAGAG TACCAGAAAG AGGTCGATGA GCTCGGAACT
TCTTTTGAAG GTATCGATCT GATTGAGGTC GCTCTTTCCT GGAATCTTGC CAAAGAATAT
CAGCGGGTTA TTGAACTTGC CCCCGGATCC CTCAAGGAAT TCACCATGGC ATACCTTCGC
CGGTGGGATA TCTATAATAT CCTGACCATT CTGCGTGGGA AGATACAGGG CATGAAGGAA
GGGAAGATTA AAGAAGTACT TATTCCTGCC GGAAGCCTTG ACCGGACTAT CCTTGACCGG
GTTTTAGCAG AAGAAAACTG CGAACGGGTT GCAGACGCTC TGAAGAGCTG GAAAATGTAT
CCGACACTTT CTGCAGAACT TTCTGAAGGA TGTGCCGTTG GTTCATTTGC CAGACTTGAA
AATGAGCTCT ACAAGCGGTT GTATGCAGAT CTTCTCCAGA TTGCCCGGAG AGGAGTGAAG
GGAGGTAACC AGTTCCTGAA ATTTGTTCAG CTGGAGATTG ATGTGAAGAA CATCAAGACG
CTCTTTCGGA TGAGGGGTGA CGGATATGAA GAAGATGCAC GTGAATTTTT CATCCCCGGA
GCCACATTCA CCCCTGAAGA GCTGCAACAG ATGAACCAGA TGACCAGCAG GAACGAGGTC
ATTGATGCCC TGCTCGCACG GATAAAGGCA AAGGCTATTC AGGTTGCCCT GGAAGATCTG
AGAACAGAAA AGTCAGAGCA GGAGGTCGAT GCTGAACTTA CCAAAACACA GCTTGACCAT
ATGGAACAGC TCTCCAAGAT TAATCCGTTC TCAATTCATC CTATCCTCGT CTATCTTGAA
AAGAAGAAAT ACGAGGTCTT CAACCTGAGA GCCATAGCCC GTGGAAAAGA ATCCCGTCTT
GCCGGTGATA CCATCGCAAA ATATCTGGTG ATATAA
 
Protein sequence
MVQNSGGPAP YIYVSTRLRV RKAKLLPPEE YQRMLNMSLP EIIRLIGETE YQKEVDELGT 
SFEGIDLIEV ALSWNLAKEY QRVIELAPGS LKEFTMAYLR RWDIYNILTI LRGKIQGMKE
GKIKEVLIPA GSLDRTILDR VLAEENCERV ADALKSWKMY PTLSAELSEG CAVGSFARLE
NELYKRLYAD LLQIARRGVK GGNQFLKFVQ LEIDVKNIKT LFRMRGDGYE EDAREFFIPG
ATFTPEELQQ MNQMTSRNEV IDALLARIKA KAIQVALEDL RTEKSEQEVD AELTKTQLDH
MEQLSKINPF SIHPILVYLE KKKYEVFNLR AIARGKESRL AGDTIAKYLV I