| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1173 |
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| Symbol | |
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| ID | 3923375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 1332796 |
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| End bp | 1334721 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637896815 |
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| Product | type II secretion system protein |
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| Protein accession | YP_502640 |
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| Protein GI | 88602462 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0525708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.392057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCTG CATGGGTTGT AAACCGGCTG GTATACAAAA ATCCGGAGAA ATATCATGAT
TTGCATATCG ATTTAATTGG TATCAGGTCC GGACTTACCC TTGAACAGTT CTTAAACAGG
GCTGTACTCG TAGGAATAGG AACAGGTATT TTTTTAGGAC TTCTGGGTTT TATTACAGGC
TTCGCATTAT TTTCTCTGGA TCTTGGATTA AAGCCTGAAT TATATAATGT CCTGAACATT
TCATATGATC CTGATACCGG AGACCTCCCA ATCATTATTA TCGTTCAGAT TTTGCTTGGA
GTCATCCTGT TCCTCATCGG TAGTTTTATC GGCTATTGGG CATACACCGT GTTACCTTCC
CTGACAAAGA AATCACGGGA GACAAAAATT ACTATTGGCC TTCCCAATGC CGTCTCGTAC
ATGTATGCGA TGAGAAAGGG AGGCGCAGAA ATAATTACCA TATTGCGCTC CCTCTCAGAG
ATGTCTGCCA TATATGGGGA AGTATCTTTG GAGTTCAGAC AGGCAGTCAG AGATGCTGAT
TTCTTCGGTT ATGATATCAT TAATGCCTTA AAGCATGTAA GTGAAACCAC CCCGAGCAGA
AAACTCAGGG ATTTTTTGCA GGATCTTATC TCTACGGTTG AGAGTGGAGG AAATCTTGCT
CAGTTCCTTC AGGACCGGGT TTTTATTCTT CAGGAAGAAG CGAAGTTTGA ACAGAAACAG
TTTCTCCAGT TCCTGGGGCT CGTGGCCGAG ATATATGTTA CCATATTCAT TGCCGGACCA
CTCTTTCTCA TCGTAATTCT TGTAGTCATG GGGATGATGG GATCATCAGC TATCCTTGAA
TTATCACTTA TCGGGTATGC CGTACTTCCC ATCGGAGCTG CCATTTTTAT ACTGATGATT
GATACCATAT CAATAAAAGA TGAGAATGTT GTCAGATATG TGAGTGCGAA ATGGCTGAAT
CAGTACTCTG ATGTCAGGAT TTCCGAGGGA GGAAATGAAG AACATCTCTT TGCCGCCCTG
GCACGGTTTG AAAAGATAAA ACCTTTAAAA AGATGGTTGG CAAACCCGGT CCAGGGATTT
GTTCAGCATC CGGAACTATC ATTTTATTTT AGTATCCCCA TAGCTCTGGC CTATGTTATC
TATATCTTTC TAACCATTCC GGTCGGGACA CTTGAGGACA ACATCAATTA TATTGATGAT
CAACTGATGA TTGCCCTTTT GATAACTCTC ATTCCGTTTG CAATTTTTTA TACCAGATGG
AACCAGAAGA TCCGATCTCT TGAGTCGATG ATTCCGGATT TTCTTGACAG GATGGCAGGG
ATTAATGAAG TCGGGATTAC CCTTACCCAG TCAATTGCGG TTATTGCACG GGCAAATATG
GGAGTTCTCG GGTATGAGAT CAGCCGGATA CACCGTGATA TTGAGTGGGG GGCAAATTTT
TCAGATGCAC TAATCCGGTT TGAACACCGG GTGAGAACGG CATTGATTGC ACGTACCGTC
ACCCTTATTA CCCGGGCAGC AACCATGAGC AGCTCAATAT CCTCACTCCT TCGTATTGCA
GCAAATGATG CACGTATGTC AGAAAATCTG AGGCGTGATC GTTTCTCGGA GATGTTTATC
TATACCGCAA TTGTGTATCT GTCATTCTTT GTTTTCATCT TTGTTATCGG AGTAATTACT
ACCCAGTTTC TCACCGTCCT TGCAGAACAG AGTAAGGAGG GGCTTGCCAT GGCAGGGCCG
CTATCAAACC TTGGATCAAC ATCACTTATT ACCATGGATC GTCTGCTCTA TCACATATGT
TTGATCCAGG GACTGTGCTC AGGGCTGATG GCAGGACTGA TGGGAGAATC CTCAATAAAG
GCAGGCGTGA AACATAGTTG CATCCTTATC ATCGGAGCAC TTGCAGCCTT TAATTTCATG
TTCTAA
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| Protein sequence | MIPAWVVNRL VYKNPEKYHD LHIDLIGIRS GLTLEQFLNR AVLVGIGTGI FLGLLGFITG
FALFSLDLGL KPELYNVLNI SYDPDTGDLP IIIIVQILLG VILFLIGSFI GYWAYTVLPS
LTKKSRETKI TIGLPNAVSY MYAMRKGGAE IITILRSLSE MSAIYGEVSL EFRQAVRDAD
FFGYDIINAL KHVSETTPSR KLRDFLQDLI STVESGGNLA QFLQDRVFIL QEEAKFEQKQ
FLQFLGLVAE IYVTIFIAGP LFLIVILVVM GMMGSSAILE LSLIGYAVLP IGAAIFILMI
DTISIKDENV VRYVSAKWLN QYSDVRISEG GNEEHLFAAL ARFEKIKPLK RWLANPVQGF
VQHPELSFYF SIPIALAYVI YIFLTIPVGT LEDNINYIDD QLMIALLITL IPFAIFYTRW
NQKIRSLESM IPDFLDRMAG INEVGITLTQ SIAVIARANM GVLGYEISRI HRDIEWGANF
SDALIRFEHR VRTALIARTV TLITRAATMS SSISSLLRIA ANDARMSENL RRDRFSEMFI
YTAIVYLSFF VFIFVIGVIT TQFLTVLAEQ SKEGLAMAGP LSNLGSTSLI TMDRLLYHIC
LIQGLCSGLM AGLMGESSIK AGVKHSCILI IGALAAFNFM F
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