Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1172 |
Symbol | |
ID | 3923374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1330877 |
End bp | 1332799 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637896814 |
Product | type II secretion system protein E |
Protein accession | YP_502639 |
Protein GI | 88602461 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00958345 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.662669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGAAT CAGATACACA AAATAAAAAG GGACAGCGGG AAAATAACCG TCGCTCTATA AAAATAAAAG TACCGAATAT TAGTATCGGC AAAAGCAGCA CTCCCCCCAC CCATACAGAG AAGCCAAAAA AAATCATTAA GAAACCAGAA ATAAAAGGAC TTGGAATAAA AAAAGTCCCC CATATCGACC TGATAAAAGA GCAACCTCAA AAAGAGATCG AGCAGCCTTC TGGAATAACC CGGATAAAAT TACCATTATT AAAACGGGAA GAAGAGATCG TTGCTGTTGA AAAAGATCTG GAAGGGACAT TTACTACCGT AAAGGAGAGT CCGGATAAGA ATTTTGATAG AAAACTCCTG AAAAAATTAA GTCTGACTCA TAAAAAAGGA TTCGAGGAGT ATGATTTTGA TAAACACGGC AGCCTTCTTG ATATAAAATT ACAGTATCCC TATGAAGCAA GGCAGGAATA CTGGGTGGAG CCTGGCCTCG CTAAGGTGGT TATTGCACAT AATGTTCGAT CCAAGCTGAG AGAGTATCTT TTATTTGAAC CCGAACTTAC CCCCTTTGAA TATGAACTTC TTGAACGAAT CCATGAGGAT CTCAGAGATG TACTCATTCT CACCGATGAG GAACTGGGAA TTGAACGAAA GAAACTTCTT ATCTCAAAAG TTGTCGATCT GATCGAATAT TACGGGTTGA AAATAGAACA GAATTCACTA TTTAAAATTG AATATTATCT TCTTCGTAAC TACCTGGGTT GGGGCCGTAT TAATGCCCTT ATGATCGATC CCCTGATTGA AGATATCTCT TGTGACGGGG ATAATATACC GATCTTTCTG TTCCACAGAA AAGAGCAGAA TATTAAAACC AACATCTCAT TTGATACCAA TTCATTAATA TCTCTCGCTA TTACCCTTGC CCAGCGATCA GGAAAACATA TCTCATCCGC GAATCCGATC ATCGATGCGA CGATGCCGGA CGGTTCACGT CTTCAGCTTA CCTTCGGGAC AGAAGTAACA TCCCGTGGGA CATCATTTAC GATACGGAAA TTCCGTGAAA CACCCTTCAC CCCGGTTGAC CTCATGGATC TTCATACGTT CAATATTGAT ATGCTGGTGT ACTTCTGGCT TTCAATTGAG AACAACATGA GTCTGGTATT TATAGGCGGA ACCGCATCTG GGAAAACGAC ATCACTTAAT GCCGTTTCTC TTTTTATACC CCCGCTTGCC AAGGTCATCT CTATTGAAGA TACCAGAGAA GTAACTCTGT TTCATGATAA CTGGATCGCC AGTGTGACAA GGGAGATTGT TGCCGAAGGT GGTGGAGCCC ATGTTGACAT GTTCATGCTC CTGAAGGCTG CAATGCGTCA GCGGCCTGAG TATATCCTGG TCGGTGAAGT CAGAGGTCAT GAAGCCCAGA CGTTATTCCA GGCGATGAAC ACCGGACATA CCACTTTTTC TACTATGCAT GCAGGAAGTG TTGATGCAGC AATACATCGT CTGGAAAACG AACCTCTGAA TGTTCCACGA AACATGCTTC AGGCACTTAA TATCATGAGT ATTCAGAAAC AGATCCAGAT CGGTCCTGAC CGGGTTCGCC GGTGTGATGA GATCGTGGAG ATTGCCGGCA TTGATCCCGC CACCGGAAAT ATCATGGTCA ATACCGTATT TGAGTACGAT CCAGTCGCCG ATGATTTTAC CTATACCGGC AGATCACAGG TTCTGGGTGA TATTGCAGCA TTTCATGGAT GGGGGCCTGA TAAACTTATT GAAGAGATGA ACCGAAGAAA AATGGTCCTG CAATCGGTAA AAGATCAAAA TATCAGGGAC TATGTCAGTT TTACGAAGGT TATCCAGGCG TACTACATTG ATAAACAAAA TGTTATAGAA CATCTCGATG ATCTTGCATC GCTGGTAGCA TGA
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Protein sequence | MGESDTQNKK GQRENNRRSI KIKVPNISIG KSSTPPTHTE KPKKIIKKPE IKGLGIKKVP HIDLIKEQPQ KEIEQPSGIT RIKLPLLKRE EEIVAVEKDL EGTFTTVKES PDKNFDRKLL KKLSLTHKKG FEEYDFDKHG SLLDIKLQYP YEARQEYWVE PGLAKVVIAH NVRSKLREYL LFEPELTPFE YELLERIHED LRDVLILTDE ELGIERKKLL ISKVVDLIEY YGLKIEQNSL FKIEYYLLRN YLGWGRINAL MIDPLIEDIS CDGDNIPIFL FHRKEQNIKT NISFDTNSLI SLAITLAQRS GKHISSANPI IDATMPDGSR LQLTFGTEVT SRGTSFTIRK FRETPFTPVD LMDLHTFNID MLVYFWLSIE NNMSLVFIGG TASGKTTSLN AVSLFIPPLA KVISIEDTRE VTLFHDNWIA SVTREIVAEG GGAHVDMFML LKAAMRQRPE YILVGEVRGH EAQTLFQAMN TGHTTFSTMH AGSVDAAIHR LENEPLNVPR NMLQALNIMS IQKQIQIGPD RVRRCDEIVE IAGIDPATGN IMVNTVFEYD PVADDFTYTG RSQVLGDIAA FHGWGPDKLI EEMNRRKMVL QSVKDQNIRD YVSFTKVIQA YYIDKQNVIE HLDDLASLVA
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