Gene Mhun_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1172 
Symbol 
ID3923374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1330877 
End bp1332799 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content43% 
IMG OID637896814 
Producttype II secretion system protein E 
Protein accessionYP_502639 
Protein GI88602461 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00958345 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.662669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAAT CAGATACACA AAATAAAAAG GGACAGCGGG AAAATAACCG TCGCTCTATA 
AAAATAAAAG TACCGAATAT TAGTATCGGC AAAAGCAGCA CTCCCCCCAC CCATACAGAG
AAGCCAAAAA AAATCATTAA GAAACCAGAA ATAAAAGGAC TTGGAATAAA AAAAGTCCCC
CATATCGACC TGATAAAAGA GCAACCTCAA AAAGAGATCG AGCAGCCTTC TGGAATAACC
CGGATAAAAT TACCATTATT AAAACGGGAA GAAGAGATCG TTGCTGTTGA AAAAGATCTG
GAAGGGACAT TTACTACCGT AAAGGAGAGT CCGGATAAGA ATTTTGATAG AAAACTCCTG
AAAAAATTAA GTCTGACTCA TAAAAAAGGA TTCGAGGAGT ATGATTTTGA TAAACACGGC
AGCCTTCTTG ATATAAAATT ACAGTATCCC TATGAAGCAA GGCAGGAATA CTGGGTGGAG
CCTGGCCTCG CTAAGGTGGT TATTGCACAT AATGTTCGAT CCAAGCTGAG AGAGTATCTT
TTATTTGAAC CCGAACTTAC CCCCTTTGAA TATGAACTTC TTGAACGAAT CCATGAGGAT
CTCAGAGATG TACTCATTCT CACCGATGAG GAACTGGGAA TTGAACGAAA GAAACTTCTT
ATCTCAAAAG TTGTCGATCT GATCGAATAT TACGGGTTGA AAATAGAACA GAATTCACTA
TTTAAAATTG AATATTATCT TCTTCGTAAC TACCTGGGTT GGGGCCGTAT TAATGCCCTT
ATGATCGATC CCCTGATTGA AGATATCTCT TGTGACGGGG ATAATATACC GATCTTTCTG
TTCCACAGAA AAGAGCAGAA TATTAAAACC AACATCTCAT TTGATACCAA TTCATTAATA
TCTCTCGCTA TTACCCTTGC CCAGCGATCA GGAAAACATA TCTCATCCGC GAATCCGATC
ATCGATGCGA CGATGCCGGA CGGTTCACGT CTTCAGCTTA CCTTCGGGAC AGAAGTAACA
TCCCGTGGGA CATCATTTAC GATACGGAAA TTCCGTGAAA CACCCTTCAC CCCGGTTGAC
CTCATGGATC TTCATACGTT CAATATTGAT ATGCTGGTGT ACTTCTGGCT TTCAATTGAG
AACAACATGA GTCTGGTATT TATAGGCGGA ACCGCATCTG GGAAAACGAC ATCACTTAAT
GCCGTTTCTC TTTTTATACC CCCGCTTGCC AAGGTCATCT CTATTGAAGA TACCAGAGAA
GTAACTCTGT TTCATGATAA CTGGATCGCC AGTGTGACAA GGGAGATTGT TGCCGAAGGT
GGTGGAGCCC ATGTTGACAT GTTCATGCTC CTGAAGGCTG CAATGCGTCA GCGGCCTGAG
TATATCCTGG TCGGTGAAGT CAGAGGTCAT GAAGCCCAGA CGTTATTCCA GGCGATGAAC
ACCGGACATA CCACTTTTTC TACTATGCAT GCAGGAAGTG TTGATGCAGC AATACATCGT
CTGGAAAACG AACCTCTGAA TGTTCCACGA AACATGCTTC AGGCACTTAA TATCATGAGT
ATTCAGAAAC AGATCCAGAT CGGTCCTGAC CGGGTTCGCC GGTGTGATGA GATCGTGGAG
ATTGCCGGCA TTGATCCCGC CACCGGAAAT ATCATGGTCA ATACCGTATT TGAGTACGAT
CCAGTCGCCG ATGATTTTAC CTATACCGGC AGATCACAGG TTCTGGGTGA TATTGCAGCA
TTTCATGGAT GGGGGCCTGA TAAACTTATT GAAGAGATGA ACCGAAGAAA AATGGTCCTG
CAATCGGTAA AAGATCAAAA TATCAGGGAC TATGTCAGTT TTACGAAGGT TATCCAGGCG
TACTACATTG ATAAACAAAA TGTTATAGAA CATCTCGATG ATCTTGCATC GCTGGTAGCA
TGA
 
Protein sequence
MGESDTQNKK GQRENNRRSI KIKVPNISIG KSSTPPTHTE KPKKIIKKPE IKGLGIKKVP 
HIDLIKEQPQ KEIEQPSGIT RIKLPLLKRE EEIVAVEKDL EGTFTTVKES PDKNFDRKLL
KKLSLTHKKG FEEYDFDKHG SLLDIKLQYP YEARQEYWVE PGLAKVVIAH NVRSKLREYL
LFEPELTPFE YELLERIHED LRDVLILTDE ELGIERKKLL ISKVVDLIEY YGLKIEQNSL
FKIEYYLLRN YLGWGRINAL MIDPLIEDIS CDGDNIPIFL FHRKEQNIKT NISFDTNSLI
SLAITLAQRS GKHISSANPI IDATMPDGSR LQLTFGTEVT SRGTSFTIRK FRETPFTPVD
LMDLHTFNID MLVYFWLSIE NNMSLVFIGG TASGKTTSLN AVSLFIPPLA KVISIEDTRE
VTLFHDNWIA SVTREIVAEG GGAHVDMFML LKAAMRQRPE YILVGEVRGH EAQTLFQAMN
TGHTTFSTMH AGSVDAAIHR LENEPLNVPR NMLQALNIMS IQKQIQIGPD RVRRCDEIVE
IAGIDPATGN IMVNTVFEYD PVADDFTYTG RSQVLGDIAA FHGWGPDKLI EEMNRRKMVL
QSVKDQNIRD YVSFTKVIQA YYIDKQNVIE HLDDLASLVA