| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1156 |
|---|
| Symbol | |
|---|
| ID | 3922802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1305745 |
|---|
| End bp | 1308201 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637896798 |
|---|
| Product | DNA polymerase B region |
|---|
| Protein accession | YP_502623 |
|---|
| Protein GI | 88602445 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.809491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCTC CGGGTGAACA ACAATCGCCG GCAGAAAAAG ATCAGAATAA GAGGATATTA
CTCAGTATAT GCCAGGTTGA ATACTCAACC GCAGCAGACG GACCCATCAT ACATATATTC
GGTCGTACTG AAACAGGGGA TTTCAAGGAG ATACAGGTTA CCGGATTTTT TCCATATTTA
TACATCCTCG CATCGCAAGT TACTAGAAAT CATCCTGACC AGGTTATCAA GATTGATCCT
ACCCCATACA CATCAATCCA TGGTGAAGAA CTGCGCAGAC TTTACACCCG AAGACCCACC
GATGTCAGAG AGGTAAGAGG GAATTACACC CATTTTGAAG CAGACATCCC TTTTGCTACC
CGTTATCTTA TTGATGCAGG AATTACCGGA GGAATATCCG TCCCGGCCGG TGCATCCATC
GTCCCATATA CCGATGTAAA ACCGGCGGAA GTCCATGCAC CAACCAGATA CTGCCTTCTT
GATATCGAAT GTGAAGACGA TAAAGGAGGT CTTCCAAACC CTGATCGTGA TCGCATCATA
TGCATTACTG CCTGGGACTC ATTTTCCGAT CACTACACAA CATTTCTTCT CCAGAATTCT
GAAAGATCAA TCAATGAAGA GAATCTCTGC AGAAACACGC TACATAACGG ATGCTTTCGT
GGTGATATTC ATACCATCAG AGTTTTTGAT GATGAAAAGT CGCTTCTCAC AGGTTTTTCC
TCATACATCA GAGAAAACAA CCCGGATATC CTTTCCGGCT GGAACTTTAC CGATTTTGAT
CTCCCTTTTA TCTTTGGCAG AATCCGTGCT CTGAATCTCC CCCCTGACAG CATGGCCCGG
TTACCTGGCA TGAGTGAGCG TTCAGGAGTC AGAGGGAGAG TAGATTTTGA CCTGCTTGCC
GGATATAAGA AGATGCAGTC ATCAAAACTG GACTCATATC GTCTGGATGC TGTCGGAGAG
CGTGAAGTTG GTGATGTCAA AGCATTCCAT TACCAGCCAG GCATGACAGC CCGGATGTGG
AATGAGGCTC CACATGAACT GGTCGAATAC AACTTCAAAG ATGTAGAGCT CTGTGTTAAA
ATTAACCAGA AGAATAACAT TATTGAGTTT TACCAGGAGA TTGCACGATA TGTCGGATGT
CCTCTTGACC GGACATTAAA CTCCTCAAAT GTCATAGACA TCTATATTCT CCGTAAAGCA
CATGGAAAAT TCATCCTGCC ATCAAAAGGC TATAGCCCGG GAGATGAATT CGAAGGTGCT
ACGGTTTTTG AACCAAGTTC AGGTATACGG GAGAACGTGG TGGTCCTTGA TCTGAAATCC
CTGTATCCGA TGGCGATGAT GACCATCAAT GCCTCGCCTG AGACAAAAGA CCCGAATGGT
GATCTCATCG CACCAAACGG AATTAAATTT CGTTCAAAAC CTGATGGCCT TACCCGGAGT
ATCATCAGTG AGCTTTTGCA GGAACGGGAT CTAAAGAAGA ACAAAAGGAA TGAATACCCC
TTTGGCTCAC AGGAATACCA GCTCTATGAC ATGCAGCAGA ATGTTATCAA GGTCATCATG
AATACGTATT ATGGAGTGAG CGGGTATTCA CGATTCAGGC TCTATGATCG GGAGATTGGA
TCTGCAGTTA CTTCAGTGGG CAGGGCGATC ATCGAACATA CCCGGAACAC TATCGAAAAT
ATGGGATATA GTGTCATATA TGGCGATACC GACTCCTGCA TGATCCAAAT ACCGGCAACA
TCTCTTGAAG AGACGATCAC CAAAGCCAGG GAGATTGAAG CGGTGTTAAA TGAGAGTTAC
AATACCTTTG CCCGGGAAGT TCTGCATGCA GAAAAACATT ATTTCTCAAT AAAATTTGAA
AAAGTCTATC GCAGGTTCTT CCAGGGAGGA AAGAAGAAGC GATATGCAGG CAATCTCATC
TGGAAAGAAG GAAAGTCTGT TGATGAGACA GATATGGTCG GATTTGAAGC GAAACGATCA
GATTCCCCGC TCCTTACCAG AAAAGTCATG AAAGAGGTCA TGAACAAGAT ATTGCAAGGT
GCAGACTTAC CAGAGATTAA AAAATACCTT GGAGATATCA TCAAAACATA CCGTTCCGGA
GGATATTCAC TTGATGAGAT CGGAATTCCC GGAGGTCTTG GCAAAGAACT GAAAGACTAC
GGGACGGACG ATGCGCATGT CCGGGGGGCT ACATATTCGA ATACTTACCT GGGAACCAAC
TTTGGCAAGG GGAGCAAACC AAAGAGGATT TATATTAAAT CCGTGAACGG TGGCTATCCA
AAGACTGATG TCCTCTGTTT TGAATATGGC GATCAGGTTC CTGATGCTTT TGTCCCAGAC
CTTGAACTGA TGCTGGAAAA GACCATCAAG TCACCAATAT CCCGGATTCT CGAACCAATA
GGATGGAGCT GGTCAGACGT GGATCCAACC CGGACCACCC TTTCTGATTT TTTTTAG
|
|---|
| Protein sequence | MISPGEQQSP AEKDQNKRIL LSICQVEYST AADGPIIHIF GRTETGDFKE IQVTGFFPYL
YILASQVTRN HPDQVIKIDP TPYTSIHGEE LRRLYTRRPT DVREVRGNYT HFEADIPFAT
RYLIDAGITG GISVPAGASI VPYTDVKPAE VHAPTRYCLL DIECEDDKGG LPNPDRDRII
CITAWDSFSD HYTTFLLQNS ERSINEENLC RNTLHNGCFR GDIHTIRVFD DEKSLLTGFS
SYIRENNPDI LSGWNFTDFD LPFIFGRIRA LNLPPDSMAR LPGMSERSGV RGRVDFDLLA
GYKKMQSSKL DSYRLDAVGE REVGDVKAFH YQPGMTARMW NEAPHELVEY NFKDVELCVK
INQKNNIIEF YQEIARYVGC PLDRTLNSSN VIDIYILRKA HGKFILPSKG YSPGDEFEGA
TVFEPSSGIR ENVVVLDLKS LYPMAMMTIN ASPETKDPNG DLIAPNGIKF RSKPDGLTRS
IISELLQERD LKKNKRNEYP FGSQEYQLYD MQQNVIKVIM NTYYGVSGYS RFRLYDREIG
SAVTSVGRAI IEHTRNTIEN MGYSVIYGDT DSCMIQIPAT SLEETITKAR EIEAVLNESY
NTFAREVLHA EKHYFSIKFE KVYRRFFQGG KKKRYAGNLI WKEGKSVDET DMVGFEAKRS
DSPLLTRKVM KEVMNKILQG ADLPEIKKYL GDIIKTYRSG GYSLDEIGIP GGLGKELKDY
GTDDAHVRGA TYSNTYLGTN FGKGSKPKRI YIKSVNGGYP KTDVLCFEYG DQVPDAFVPD
LELMLEKTIK SPISRILEPI GWSWSDVDPT RTTLSDFF
|
|---|
| |