Gene Mhun_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1150 
Symbol 
ID3922792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1295017 
End bp1295877 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content40% 
IMG OID637896788 
Productnucleoside 2-deoxyribosyltransferase 
Protein accessionYP_502617 
Protein GI88602439 
COG category[F] Nucleotide transport and metabolism
[S] Function unknown 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase
[COG5418] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.404491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTC TTTTATGTCC CTGCATAAAA AATCCAGAAC TTCGTGCACG AGGAATCACT 
CATCAAAAAG ATTTAGATGC ATTTTCTCAG GTTTTATTCC GATGTGAAAC GTTTAAAATA
CCTGTGAAAA TGCTTCCTTG TGCAGAGACG ATGTACCTGG GGCCTGATCA TGAGCCAGGG
CATTATCTTG GTCGATTGGA TAATCCGGAT TTTTCAGATC TTATATGCAG ACTTGAAACC
AATGTCCGCG AAGATTGGAA AAGTGATGGT CGTCCATATG CGATCATTGG AGTTGATTCA
TCTCCGGTTT GTGGGGTGCG AAATACCTGG TATGGATCGG TTCATGGCTC TAACGGAAAG
ATACCTGGTA GAGGGTTCTT TCTAAAACGT TTTTCAGATA TAATGGCCTT TGATGTCTTT
GAAGCAGCCT GTTGGAAAGT TTATCTTGCT GCACCTTTAT TTTCCGAAGC TGAGTGTGAT
TTCAATAGAA AAGTAGCGGA TATATTAACT GGTTATGCTA TGCAGGTTCA TCTTCCCCAG
GATTGTGGAG ATTCGGAACA TTCACGGGAA TTATCTATTC AAAGAGAAAT ATTTGAAAAA
AATGTACAAG CTATTCACAA TGCTGATATT GTTGTTGCTG TGATAGACGG TGCTGATGCA
GATTCTGGAA CTTCCTGGGA GATTGGATAT GCATTTGGAC TTGGGAAAAA AATAATTGCA
CTTCGGACAG ATTTCAGACA TGTAGGTCAC AATGAGATGG TAAATTTAAT GCTTGAGCAG
TCATCTGTAG TTGTGAATAA TATACCATCG CTCATTCAAG CCTTACCCTG TCCCATTCCA
ATTCGACCCT TAAAAGAATA G
 
Protein sequence
MYLLLCPCIK NPELRARGIT HQKDLDAFSQ VLFRCETFKI PVKMLPCAET MYLGPDHEPG 
HYLGRLDNPD FSDLICRLET NVREDWKSDG RPYAIIGVDS SPVCGVRNTW YGSVHGSNGK
IPGRGFFLKR FSDIMAFDVF EAACWKVYLA APLFSEAECD FNRKVADILT GYAMQVHLPQ
DCGDSEHSRE LSIQREIFEK NVQAIHNADI VVAVIDGADA DSGTSWEIGY AFGLGKKIIA
LRTDFRHVGH NEMVNLMLEQ SSVVVNNIPS LIQALPCPIP IRPLKE