| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1147 |
|---|
| Symbol | |
|---|
| ID | 3922789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1290639 |
|---|
| End bp | 1291661 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637896785 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_502614 |
|---|
| Protein GI | 88602436 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.50156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAT CAGAGAGTTT ATATCAGATC TGGTATGAGC TCACCTCCGG GATAGAGGAT
GGTATTGTAA TTCTAAACAC ATTAGATATC ATCTGTCACC TGAACAAAGG TATTTCTCAG
TTATTTCCAG TCACCAGAGA GAATTATGTC GGCAGACAAT TTGATGAATT CATTGAGGAA
GTTGTTCTTC CGGTGATAAA AAACGCAGAT AGTATCTCAC CGAATGGATA TCACCTTATT
TCTTCCACCC TGAAAGACCA AGATCTTTAT ATTTTTTCCG GACCTGGAAA GGGACAGTCT
GTAGAATTTT CCATTCTGGA GAAGAATGAT TCTGATTACC ATTGGAAAAT GGGGTATTTC
CGGAGAATCA CCAGATGGAA AAAGACTGAA GAACTCTTAA TCAGGATAGA GGAGCGATTC
AGAATTATTT TTGAAAATCT TTTTGACTCT GTCGCCATGT ATCCAGTTGA TGAATCATTT
TATCCGGGGC ACTTTATTGA AGCTAATTCA TCATCGGTAA AAAGGCTGGG ATACACCCAG
GCGGAACTTA TGAGGCTATC GCCTGCAGAC ATTCTCCCCC CTGAAGAGTT TGGACGTTTT
TTATCATTCA TTAAAAATTT TAGAATTTCA CCAGTTCAGA CCGCAGAATT TTCAGAAGTT
ACAAAAGATG GAACGATCAT TCCTGTCGAG ATAACAGCTC TTGTTGTAAA AATCCGAAAC
GAAGAATTCA TAATTCAGAT CTCAAGGGAT ATTTCAGATC GGGTTAAAAT CAGGCAACTC
CAGATGAATG CATTTGAACA GATCAATAGG AATATTGAAC AGTTTGCAAT TTTAAATGAT
CGGATTCGTA ATCCATTAAG TGTTATCCTG ACACTTGCAT CATTCTCTGA AACTCCTGAA
AGCACCAGAA TTGCTGAACA GGTACATATC ATTGATTCTC TGGTTGATGA ACTTGATAAA
GGATTTATTG AATCAGAAAA AGTCAGGAAA TTTCTTGTCC GATATTTTCA GGCAGATACA
TGA
|
|---|
| Protein sequence | MDSSESLYQI WYELTSGIED GIVILNTLDI ICHLNKGISQ LFPVTRENYV GRQFDEFIEE
VVLPVIKNAD SISPNGYHLI SSTLKDQDLY IFSGPGKGQS VEFSILEKND SDYHWKMGYF
RRITRWKKTE ELLIRIEERF RIIFENLFDS VAMYPVDESF YPGHFIEANS SSVKRLGYTQ
AELMRLSPAD ILPPEEFGRF LSFIKNFRIS PVQTAEFSEV TKDGTIIPVE ITALVVKIRN
EEFIIQISRD ISDRVKIRQL QMNAFEQINR NIEQFAILND RIRNPLSVIL TLASFSETPE
STRIAEQVHI IDSLVDELDK GFIESEKVRK FLVRYFQADT
|
|---|
| |