Gene Mhun_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1119 
Symbol 
ID3922484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1262481 
End bp1264121 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content54% 
IMG OID637896758 
Producthypothetical protein 
Protein accessionYP_502587 
Protein GI88602409 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAG TTGAGATCCT CAGCCGTGAC GGAACAGCCC GGTATGGTCG CCTGACCGTG 
GACGATACTA TTCTCAACTT CCCGTCTGCT ACCGATACGA CCAGGCTCTT TCCTGCCCTG
AATACCCGGT CCGGAACAAA CATCCCGCCG ATCGAGGATC CGGATTTTGT ATCCCGGTTC
CTGATCCGTG ACGGAGAACA ACCAATACCG CTCCATATTC ATGCACCAGT CAATATTCAG
TCAGGAGATA CGGTCATCAC CCCGAACTGG CATACCCTGC TCTCCCGTCC CCGAGACTTC
TGTCAGCTCC TGGATCAACT GAAAGCCTCC ACACCGCCGG ACACCTGCTG GTATCTCCCC
GGTGCAGCAC TACCGGAAAA TGCGGCAATT CTGGTTCATG CTGGTTTTGA TCTCTTTGAT
TACATCGCAA CCGACCTAGC AACGACCCAG GAGAAATTCT GTCTCCCCGA CGGACAGTAT
CCGGAAAAAG TGATGGAAGA AGGACTCTGT TCCTGCCAGG GATGCCTGAG TGGAGATCTC
CTCCTGCATA ACCGGATCGC ACTCGACCAG GAACTGGCGA GAATCGGGCG CAGGATCCGC
GACGGGACAT TTCGTGAGTT TCTTGAGGGA AGATGCAGGA CAAAACCAGA ATTTGTCTCG
ATCATGCGTC ATATTGATAA GTCAGACCGG ATGGAGCAGT ATTGTCCGGT ATCCCGTACT
GTGCCCTTCC TTGCAACATC CGGAGACAGC ATTCACCGGG TGGAAGTCAG ACGGTTTGCA
GACCGGCTGG TTGAGCGGTA TATCCCACCG GTAGCAGATG TGGCGGTTCT GATTCCCTGT
TCAGCAAAAA AACCCTACAG CCTCTCCCAG TCTCATCGCA AATTCAGCCA GGCCATCGGA
AGACGGGCAC ATGAACTGAT CATGACCTCT CCCCTGGGAC TTGTTCCCCG TGATCTTGAG
CTCTGTTATC CTGCCGCAGC ATATGATGTG CCGGTCACCG GGTATTGGGA TCATGAGGAG
CGGTACCAGA TCACAAATAC TCTTGTCAGG TACTTTACCA GACATCCCTA CCGTCGGGTC
ATTGCTCATC TGGATGGGGA TGCACGAATC ATTGCACAGG ATGCTGCAGA TCAGGCAGGA
TTTGAGATAG AATTCACCTG CGAGACAGAC CGGCTGACTG ATCCCGCATC ACTTCAGGCA
TTAAGCGAGG CCCTTTCCGG TGAGCGAAAG GTTAAATCGC ACCTGGTCAG GGGGATGATC
TCATTCCAGT TCGGGTATGA TCTCAAGGCG CCAAACCTGG AAGTAAAAGG TTCATATCCG
GAGCAGGTGG TAAAGCGGGG CAGAAATCTC TACTTCTCAA CCGACCCCGC TCACGGTCTG
ATAAGACCCA CCTTTGAAGG CTGGTCGCTC ATTGAAACCG GGTACCGGGT ATATATCGAT
GAGTTCGTGC CCCAGGGTGA TATCCTGGCG CCAGGTGTCA TTGATGCCGA CCCGGTCATC
CGCCCTGGTG ATGAAGTGCT GGTCATCGGA GATAAGGCCA TGACAACCGG ACGGGCAGTC
ATGAGTGCTG ATGAAATGAT CCGATCCTCC CGCGGTGTTG CTGTCCGGGT GCGTAAAGTA
AAGAAGCTGG ACGGGCAATA A
 
Protein sequence
MKGVEILSRD GTARYGRLTV DDTILNFPSA TDTTRLFPAL NTRSGTNIPP IEDPDFVSRF 
LIRDGEQPIP LHIHAPVNIQ SGDTVITPNW HTLLSRPRDF CQLLDQLKAS TPPDTCWYLP
GAALPENAAI LVHAGFDLFD YIATDLATTQ EKFCLPDGQY PEKVMEEGLC SCQGCLSGDL
LLHNRIALDQ ELARIGRRIR DGTFREFLEG RCRTKPEFVS IMRHIDKSDR MEQYCPVSRT
VPFLATSGDS IHRVEVRRFA DRLVERYIPP VADVAVLIPC SAKKPYSLSQ SHRKFSQAIG
RRAHELIMTS PLGLVPRDLE LCYPAAAYDV PVTGYWDHEE RYQITNTLVR YFTRHPYRRV
IAHLDGDARI IAQDAADQAG FEIEFTCETD RLTDPASLQA LSEALSGERK VKSHLVRGMI
SFQFGYDLKA PNLEVKGSYP EQVVKRGRNL YFSTDPAHGL IRPTFEGWSL IETGYRVYID
EFVPQGDILA PGVIDADPVI RPGDEVLVIG DKAMTTGRAV MSADEMIRSS RGVAVRVRKV
KKLDGQ