| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1069 |
|---|
| Symbol | |
|---|
| ID | 3925171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1205091 |
|---|
| End bp | 1206137 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637896709 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_502538 |
|---|
| Protein GI | 88602360 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.149504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.1643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGTTA TTCAAACAAT ATTTGACGAA GGTGATACCG GTCTTACTAT CATTCTTGAG
GATATTACAG ATACGAAAAA ATACCTGAAA AATATGGAAT TTCTAGCTCA TACTGCCATG
GAACTGGTTG ATCTGCCATC CGATGCGAAT ATTTATGAGT ATATTGCCGA CAAGGTTTCA
GAACTCCTCC CCAAACCCCC CCGGACCTGG GTTGTTTCGT ATGATCCATT GAAGAAAGGG
TACAAGATCG AGTCAATCCG GGATGCATCA TTTTTCGAAT GTTCAAGACA GCTCAATAAC
GGGAATGATG TATCCGGTCT TGTTTTTCCC ATTCAGGAAT ATATGAGTAA GCCTCCCTAT
TATGAGACCG TTGAAACGAT GAAGATTATG AGGGAGTTTC CATTTCGGCC CTTTTTTCCG
TATGAACCGC TTTCTTTTTA TGATATCTGT AGTGAGGTAT TTTCAAGGGA AGTTTGTGAA
GCCTTTATCG TGCAGCAATC AATAGGGAAG ATGTGTATCG CTGGTCTGGC CTGGCAAAAC
CAGCTCTTTG GGTTTGTAGG GATGTGTCTT CGGCCTGATG AAGAACTGGA AAACCATATG
GTTATTGAGT CATTTATTCG TCAGGCTTCC ATAGCGATTG CCAGAAGACT TACGCAGGAG
TGTATGAGCA AGAGTGAATC CCGGTTCCTG GATGTTATCG CATACATTGG TGATCCGGTT
CTCATTACCG ACTATGCTGG TGGAGTAACC TACCTGAATC CTTCGTTTAT CTCTGAATTT
GGATATACCA TCGATGATAT TCCTGAATGG AATACCTGGG TCCGGAAAAG TAGTCCTGAT
AGTAAAAACC GGGAGTTGTT GATGCATATG TATGAGCGAT TGCCTGAAAT GGCATATCAG
GAGATCATGT GCTCAGTTCA ATGCAAAGAT AATTCTCTAA AACCTGTTCA TGTCCGATGC
GTTGTATCTC CTGATGGCAT GAGGACGATA ATTTTCCGGA ATAGTACTAA TATATCCGGT
TCATCTGCAT CGGCTTCGTG TATATAG
|
|---|
| Protein sequence | MEVIQTIFDE GDTGLTIILE DITDTKKYLK NMEFLAHTAM ELVDLPSDAN IYEYIADKVS
ELLPKPPRTW VVSYDPLKKG YKIESIRDAS FFECSRQLNN GNDVSGLVFP IQEYMSKPPY
YETVETMKIM REFPFRPFFP YEPLSFYDIC SEVFSREVCE AFIVQQSIGK MCIAGLAWQN
QLFGFVGMCL RPDEELENHM VIESFIRQAS IAIARRLTQE CMSKSESRFL DVIAYIGDPV
LITDYAGGVT YLNPSFISEF GYTIDDIPEW NTWVRKSSPD SKNRELLMHM YERLPEMAYQ
EIMCSVQCKD NSLKPVHVRC VVSPDGMRTI IFRNSTNISG SSASASCI
|
|---|
| |