Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1032 |
Symbol | |
ID | 3924640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 1163740 |
End bp | 1164534 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637896670 |
Product | prephenate dehydratase |
Protein accession | YP_502501 |
Protein GI | 88602323 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.506723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.948926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCTCA TAACTCTTGG TCCAGCAGGG ACTTTTTCGC ATGATCTTGC ATGTATGATA GATACGGAGA TCATTCTCGT CCCGACAATC GGCCGGGTTT TTACTCAGGT ACTTCAGACC GGCATCCCGG GTCTTGTTCC TCTTGAGAAC AGTGAAGCCG GTGGAGTTAC AGCAACCATG GACGGCCTCA TGCAGCATCC GGTTTACATC TCTGAAGAAC GGTACATGCC GATTCATCAT ACTCTGGCAT CACATACAAC TCTCGATAAA ATTTCAGTTA TCTTCGCTCA TCCGCAAAGT CATGAGCAAT GCAGCAAATT TATTGATGAT CTGGGCATTC CGGTCATTCA TACCGAGAGT AATGCTGCAA GTGCCCTTGC CCAGAAAGAA CGACCAGGAT CTGGTGCCAT TCTTTCACAG ACTCTGGCTG ATAGTTCAGG TATCCCGGTA CTTGCCAGTA ATATTGAGAA TAATCCCGAT AATATCACCC GGTTCATTGT GATTCGGAGA GAGCCCTACA GCAATGAACA TCCAGAAAAA TGCAGTATAA TAGTTGATCC AGGAGAAAAC CGCGCCGGTC TTTTATATGA TCTTCTCAGT CCATTCAAGG AGACCGGAGT AAATTTGACC AGGATTGAAT CACGGCCTTC AAAGAGATGT ATGGGAAATT ATGTCTTCTT TATTGACCTG CAATGCGAAG GTGAATGGAA AGAGGCAATT GATCGTATCA GGAAAATCAC CAGGGTAAAA CATCTGGGTT GTTATCATCT GACCGGAGAG AATCCATGCA GATGA
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Protein sequence | MTLITLGPAG TFSHDLACMI DTEIILVPTI GRVFTQVLQT GIPGLVPLEN SEAGGVTATM DGLMQHPVYI SEERYMPIHH TLASHTTLDK ISVIFAHPQS HEQCSKFIDD LGIPVIHTES NAASALAQKE RPGSGAILSQ TLADSSGIPV LASNIENNPD NITRFIVIRR EPYSNEHPEK CSIIVDPGEN RAGLLYDLLS PFKETGVNLT RIESRPSKRC MGNYVFFIDL QCEGEWKEAI DRIRKITRVK HLGCYHLTGE NPCR
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