Gene Mhun_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1032 
Symbol 
ID3924640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1163740 
End bp1164534 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content45% 
IMG OID637896670 
Productprephenate dehydratase 
Protein accessionYP_502501 
Protein GI88602323 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.506723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.948926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCTCA TAACTCTTGG TCCAGCAGGG ACTTTTTCGC ATGATCTTGC ATGTATGATA 
GATACGGAGA TCATTCTCGT CCCGACAATC GGCCGGGTTT TTACTCAGGT ACTTCAGACC
GGCATCCCGG GTCTTGTTCC TCTTGAGAAC AGTGAAGCCG GTGGAGTTAC AGCAACCATG
GACGGCCTCA TGCAGCATCC GGTTTACATC TCTGAAGAAC GGTACATGCC GATTCATCAT
ACTCTGGCAT CACATACAAC TCTCGATAAA ATTTCAGTTA TCTTCGCTCA TCCGCAAAGT
CATGAGCAAT GCAGCAAATT TATTGATGAT CTGGGCATTC CGGTCATTCA TACCGAGAGT
AATGCTGCAA GTGCCCTTGC CCAGAAAGAA CGACCAGGAT CTGGTGCCAT TCTTTCACAG
ACTCTGGCTG ATAGTTCAGG TATCCCGGTA CTTGCCAGTA ATATTGAGAA TAATCCCGAT
AATATCACCC GGTTCATTGT GATTCGGAGA GAGCCCTACA GCAATGAACA TCCAGAAAAA
TGCAGTATAA TAGTTGATCC AGGAGAAAAC CGCGCCGGTC TTTTATATGA TCTTCTCAGT
CCATTCAAGG AGACCGGAGT AAATTTGACC AGGATTGAAT CACGGCCTTC AAAGAGATGT
ATGGGAAATT ATGTCTTCTT TATTGACCTG CAATGCGAAG GTGAATGGAA AGAGGCAATT
GATCGTATCA GGAAAATCAC CAGGGTAAAA CATCTGGGTT GTTATCATCT GACCGGAGAG
AATCCATGCA GATGA
 
Protein sequence
MTLITLGPAG TFSHDLACMI DTEIILVPTI GRVFTQVLQT GIPGLVPLEN SEAGGVTATM 
DGLMQHPVYI SEERYMPIHH TLASHTTLDK ISVIFAHPQS HEQCSKFIDD LGIPVIHTES
NAASALAQKE RPGSGAILSQ TLADSSGIPV LASNIENNPD NITRFIVIRR EPYSNEHPEK
CSIIVDPGEN RAGLLYDLLS PFKETGVNLT RIESRPSKRC MGNYVFFIDL QCEGEWKEAI
DRIRKITRVK HLGCYHLTGE NPCR