| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1030 |
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| Symbol | |
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| ID | 3924638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1161099 |
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| End bp | 1162463 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637896668 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_502499 |
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| Protein GI | 88602321 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGATCG GTTATCGGGG GACCGGTAAA AGCAGTATTG GAAAGGCGCT TTCCCGAATG
ACCGGTCAGG GATACCTCGA TACAGATCAA CTCATTGAGG ATGTGACGGG AAAGAAGATT
TCTCAGATAT TCGAATCAGA AGGAGAAGCC GGATTTCGTG AGATTGAGCA ACATGTCATT
GCACGAATAC CATCTGATGC AGGGATAATC AGTACCGGGG GTGGAGCAGT TATTCGGCCT
GTCAATGTCC GGATGCTGAG AATGAATAGT CTTGTAATCC TTCTGAATAC AAGTCCTGAA
GTGATTTTTA ATAGGATTCA TAAATCTGAC CGTCCTTCCC TTACCGGACT TTCTCCCAGG
GAAGAGATAG AACAGGTCCT GAAAGAACGA ATGCCGATAT ACCGGAGTGT AGCTGACATT
GTGATAGATA CCACCATCAC CACACCAGAG GAGGCAGCAA AACAAATTCT GAATCTGATT
GAAAATGGAA TTTGTGTTCC GGATAAACGG AAAGAGCTCT TTGCCTCTGT CATGAAGACT
GCAATCCCAT CAGGAGAAAA GATTCATCTT AAAAAGATAT CCGGGGATTA TGATATTTTC
CTCTATGGAA TTTTGGGATA TCCATGTATG CATAGTAAAA GCCCGGGGAT ATACAATCAT
TTATTTGCAG ATTATGGGAT GCCAGCTCAT TACACCTGGT TTGAACACAA GGATCCCGGT
CGTTTCCTCT CACTTTTGCC AGGGACCGGA GTTCGGGGAC TATCGGTGAC CATCCCTCAC
AAAGAGACAG TCATTCCCTA CCTGGATGAG ATCAAGCATG ATGCTGAATC CATTGGTGCG
GTAAACACCA TTCTCATTCA GGATGATAAA AAGTATGGAT TTAATACCGA CTGGAAAGGT
ATCTACCGGC CTCTTGAAGG GACTCATGGA GACACAGCAG TAATTCTCGG AGCGGGTGGG
GCAGCAGCTG CGGCAGTATA TGCTGTTTCT ATGCGGGGAT TTACACCGGT GATCCTAAAC
CGGACACCTG AACGTGCTGA GCATCTTGCA AGAAAGAGTG GTGCAGAGAT TGGAACCCTT
GCTGATATTG GAAAATATCA TCCGGATCTT CTTATCAATG CAACGCCTAT CGGAATGGGA
TCAGACCCGC ATACCCCGAT CCCTCCATCC GCCCTGGAAC CTGGGATGAA GGTATTTGAT
CTGGTCTATA CTCCCCGCGA TACTCCCCTT CTTCAGGCCG CCCTGGCTTC AGGTTGCTCT
GTAATCCCTG GAACCGAGAT GTTTATTCAT CAGCTCGCTG AACAGTTCCG GATTCTTACC
GGGATTGAAA CTCCGATCTC GCGACTTCGG GAAATACTGG CATGA
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| Protein sequence | MLIGYRGTGK SSIGKALSRM TGQGYLDTDQ LIEDVTGKKI SQIFESEGEA GFREIEQHVI
ARIPSDAGII STGGGAVIRP VNVRMLRMNS LVILLNTSPE VIFNRIHKSD RPSLTGLSPR
EEIEQVLKER MPIYRSVADI VIDTTITTPE EAAKQILNLI ENGICVPDKR KELFASVMKT
AIPSGEKIHL KKISGDYDIF LYGILGYPCM HSKSPGIYNH LFADYGMPAH YTWFEHKDPG
RFLSLLPGTG VRGLSVTIPH KETVIPYLDE IKHDAESIGA VNTILIQDDK KYGFNTDWKG
IYRPLEGTHG DTAVILGAGG AAAAAVYAVS MRGFTPVILN RTPERAEHLA RKSGAEIGTL
ADIGKYHPDL LINATPIGMG SDPHTPIPPS ALEPGMKVFD LVYTPRDTPL LQAALASGCS
VIPGTEMFIH QLAEQFRILT GIETPISRLR EILA
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