| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1015 |
|---|
| Symbol | |
|---|
| ID | 3924783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1145073 |
|---|
| End bp | 1146062 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637896653 |
|---|
| Product | asparagine synthase |
|---|
| Protein accession | YP_502484 |
|---|
| Protein GI | 88602306 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0384423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTGA CCGGTTGGAT CGAGCTGGAT GGAATACCGT TATCTCATGA AGAAATTATT
CAAAAATTAT CCGAGGATCC TCAAATTGTC ACACACTTTG GCGGAGAATT CTATCTAGAA
TATGATTCAT GTGTTGCACG GGATCATTTT GGCATTATTC AGGGTCCATG TCCGGCCGGG
ACAATCATCT GCAATGGTTC TGTTACTGGT TCGGTAAAGC CGTCCTGCCC GTGTCTTCCC
CTTGCTGATG CAATCAGGAC TGCCATTGAA CTGAGATCAG ATTCCGGTAT TACTGCTCTA
TCCGGTGGTG TGGATTCAGC TCTGGTAGCA GCAATCGCAA AACGTCCCTG TCTAGTGGTA
GGCATGGAAG GATGCCATGA TATCAGGCAG GCTACTGCAG TTGCACAAGT TCTGGATCTT
CCCTTACACG TAAGGACTAT AACACCGGAG GATGTCGCAG CAGCTCTACC GGTTGTTATC
TCCCTCATTG ATGATCCAAA CCCGGTTGAT GTGGCCATTG GAACAACTCT GTTTTTTGTT
GCAGAAACAG CCCAAAGTCT TGGGTATGAG CGAATTCTGA CTGGTCAGGG AGCAGATGAG
GTCTTTGGAG GATATTCCAG GTACCTGGAG ACTCCGGAAC ATCTCCTGGA AGAGGTCTTT
GCCCGTGACT TTGCTTCTCT TCCCCGTCAG GGATGCCGGG ATCAGAGTAT TGCAGGATCC
ATGGGTGCCT ACCTGTCAAT GCCATATCTT GATATCAGGG TTGTATGCGC TGCACAGGCA
ATACCCCCTC GTGATCGGGT TACGGGTGGG GTCCGAAAAA AACCACTTCG GGAAGTTGCC
AGACTGTATC TGCCTGAATC ATTCGCATAT TATGATAAAA AGGCAATGCA GTACGGGACC
GGGATCTGGA AAGAGATAAA ACGGATTGCC CGGCAGAATG GTTATCACAG TTCTGTTTCA
GATTTCATTA CACATTTAAG GAGGACGTAA
|
|---|
| Protein sequence | MHLTGWIELD GIPLSHEEII QKLSEDPQIV THFGGEFYLE YDSCVARDHF GIIQGPCPAG
TIICNGSVTG SVKPSCPCLP LADAIRTAIE LRSDSGITAL SGGVDSALVA AIAKRPCLVV
GMEGCHDIRQ ATAVAQVLDL PLHVRTITPE DVAAALPVVI SLIDDPNPVD VAIGTTLFFV
AETAQSLGYE RILTGQGADE VFGGYSRYLE TPEHLLEEVF ARDFASLPRQ GCRDQSIAGS
MGAYLSMPYL DIRVVCAAQA IPPRDRVTGG VRKKPLREVA RLYLPESFAY YDKKAMQYGT
GIWKEIKRIA RQNGYHSSVS DFITHLRRT
|
|---|
| |