Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1002 |
Symbol | |
ID | 3924562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 1128540 |
End bp | 1129766 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637896640 |
Product | phage integrase |
Protein accession | YP_502471 |
Protein GI | 88602293 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.606138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00492215 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCAAACA ATCCGAATCA ACATTTTTAC AGATCTGATG ATCAATATCG TGAACAAATT GACCGGACAC TAACCCGCAA AAAGGAAGCG TCCGAAATTA CAGAGTCTGA TGAGAAGATC ATACGGGCGT TTATTGCTGA ACTCCGGGCG GTAAATGGTA TCAGCGATAC CAGAGCCTCG AAACTTGTTA GCAATATATC CGGACTTCGC CGATGGTTGC CACCATTTGA TCAAATGGTC ACATCGGATA TTTATCATGC AATTGATCAG ATTCAGCATC ATGGTTTCAA ACAGAACACA ATGGCTGATC TCATTCGAGG GATGCGAAGG ATCGCACTAT ACCTATGTGA AAATAATATG GCTGCACCTG GGCTTGATGC TTTGAAGATT CGAAAGATAC ATCCGCCTGG TTATGATTCG GCGACTAAAG ACATATCAGA TCTATTGACT CCCGATCAAG TGATGAGTAT GATTAGTCAC GCTGGCAGCA TAAAGAATCA GGCTATTATT AGCACGTTAT ACGAAGGCGG AATGAGAATT GGTGAGATAG GTAACTTACA ATGGAATCAG GTAAAGTTCC ATGAAGAGCA CGTGTCTATC AGCACCACAT TTAAGACTGG CAAAGCGAGG ACAATTCCTC TATTTAACAG CCGTGGATAT CTGGCACAAT GGAAAAATGA ATATTCAGGA AATGCAGATA AACCGGGGGC TTTTGTATTT GTAAAAAGTG ATGGAAGTCC ATATTCCTAT GCCGGACTAG TAAAAATGAT TCGGAAGGCT GCAACCAATG CAGGCATTGA ACATACGATA ACCCCCCACG TGTTCAGACA TAGTAGAATC ACGCATTTGA TAAAAGAAGG TTGGAAAGAA TCAATAATCA AAAAAATGTG TTGGGGCAGC GTCGAGACTG ATATGTTCAA AGTTTATTTA CATCTCTGCG ATGAAGATAT CGAAAATGAA GCAGCGGGAT CATTAGGCAT TAAACGGCGT GGAAGACCAA CAATTGAGTC GAAGCGGCTT GAACCTATCC AATGTCACAA ATGTGGCGTT GTCAATCCGT TTACTCATTC GTTTTGTTCA TCATGTGGAG CACCGCTTAA CAAGGATGCA ATTCAGACCG CTGAAGCAGC GACATCGATC TTAAGTGACT TATTGACCGG GGAAAAAGGT GAAGACATCC TTCGGGAGTT AATTCTTCTG CAAAAGAAGA AAATAACTTC AGAATGA
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Protein sequence | MPNNPNQHFY RSDDQYREQI DRTLTRKKEA SEITESDEKI IRAFIAELRA VNGISDTRAS KLVSNISGLR RWLPPFDQMV TSDIYHAIDQ IQHHGFKQNT MADLIRGMRR IALYLCENNM AAPGLDALKI RKIHPPGYDS ATKDISDLLT PDQVMSMISH AGSIKNQAII STLYEGGMRI GEIGNLQWNQ VKFHEEHVSI STTFKTGKAR TIPLFNSRGY LAQWKNEYSG NADKPGAFVF VKSDGSPYSY AGLVKMIRKA ATNAGIEHTI TPHVFRHSRI THLIKEGWKE SIIKKMCWGS VETDMFKVYL HLCDEDIENE AAGSLGIKRR GRPTIESKRL EPIQCHKCGV VNPFTHSFCS SCGAPLNKDA IQTAEAATSI LSDLLTGEKG EDILRELILL QKKKITSE
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