| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0996 |
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| Symbol | |
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| ID | 3924043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1120537 |
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| End bp | 1122441 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637896633 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_502465 |
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| Protein GI | 88602287 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.325764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0470836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG GAGCAATACT CCCGGTTCTT GCGTTACTTT TCCTGTCAGT GCTGACTGCA
GGAGTTGTAG CAGAAGAGAA TGCAACGGGA TCCGGGTGGT ATGATCAGGG GCTCACCGCT
CTTGAGAATG AAAACTACGA AGAAGCTATC TCCAACTTTT TAAAAGCAGT CGAAGAAGAT
CCACAGAATG AACAGGCATA CTCCAAACTT GGTGGATCTT ACCTGATGAC CGGTGATGTT
GAATCTGCAA TTTACGCATT TCAGAATGTA ACCAATTTAA ATCCTGAAAA CGGAGTTGCA
TGGGGCAATA TCGGATACCT ATACCTCGTT GGAAAGGAAA AACCCGACCC GGTCCCGGCA
CTTGAAGCCC TGACGAAGGC TGTGGAGGTT AAAACCGATG ATCCAGGAAT CTGGACGAAC
TATGGTATTG CGCAGCTTCT CAATACCGAC TCAGAATCTG CACTTGAATC ATTCAATAAA
GCTATTGAAC TTATGCCTGA TGGTTCCCGT GCATATTACT GGAAAGGAAT TACACTCTCT
GATCTTGGTC AGCCAGAGGA AGCCCTGACT GCATATGAGA AGGCAATCGA ATTGAATCCT
GAATTTAAAG ATGCCCTGTA TGCAAAAGGT ATTGCAGAAA GTGCACTGGG TAAATTTGAT
GAAGCAGAAG CAACCTTTAA CCAGGTACTC ACCATAGAGG GAGATTACTC TGAACCATTC
CTGACCGTCG GAAGCGATTC TGATGTCTGG GACCGGAAGG GACGTATCCT CTTTGAAGTC
CGGAACAATC CTGATGAAGC ACTTACCGCC TTTAACAAGG CAGTTGAACT GAACCCCTAC
AATGCAAACG CGCTCTATTA CAAGGGTCGG GTTCTCTATG ACCAGGGAGA TCTAACCGGA
GCAATGGAAG CATTTACTGC AGCATCAGAA GCAGATCCCC AGATGGGTGT TGCACATTAC
TGGAAGGGAC AGGTATACAT TGACCAGAGC GACAGATCAG GAGCGATTGC AGAATTCAGA
ACTGCAACTG AGTTAAATCC GAATCTTGCT GATGCATGGT ACTATCTTGG TGGTCTGTTA
AGTGACGAAG GCTCGTATGA TGAAGCAACA ACAGCACTTG ACAAGATGAT TGAACTGAGA
CCTGATCTTG CTGATCCATA TTACCTGAAA GGTCTGACTC AATATCAACT TGAAAACTAC
CAGGATGCTG CTGACTCACT TGAACAGGCA ACTGCACTCA ATGCATCTCA GATGACTGAA
GATGATCGCT CTAAGGCATA CTATACGCTT GGACTGGCAC GTGTTCAGAA TGAAGATAAT
CAGGGGGCCT CAGAAGCCTT TGCAAAGGCT GTTGAACTCA ATGCAACCAA TGCGGTCGCA
TGGAATGATT ATGGTGTTGT CCTGAATGAG CTTGAAAACT ATGAGGAAGC ACTGAAAGCC
TTTAATGAAG CGATAAAGAT CTCTGACTCT GAAGCAGAAT ACTACTATAA CCAGGGAACC
ACTCTTGTAA AACTGGACAA GCTCGATGAG GCGATCGCAG CATTTGATAA GGCAGTCGCG
ATTGAACCAA GTCCACGTGC ATATCTTGCA AAGGGATTGG CATTAATCAC CCAGGAGAAC
TTCGAAGAAG CTCTGAAGGC ATTTGAATCA GCAATAGCAC TTGATGATAC CAAAGCTGAC
CTGTGGGCAC AGAAGGCATT TGCTCTCTAC AAACTGAACA AGATGGATGA GGCACGGGCC
GCAGTCGATA AGGCCCTCTC CTATGATCAG GAATTCAAAT ATGCCCTTGA CCTCAAGGAG
CTTATTGAGA ATCCTGAAGG CGGAAATGTC ACTCCGTCAC AGTCTGATGG AGAAACAAAT
GTAACTGAAG AGGTTGGGGA AGGAACCCCT GCATCCTCCA GCTAA
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| Protein sequence | MKIGAILPVL ALLFLSVLTA GVVAEENATG SGWYDQGLTA LENENYEEAI SNFLKAVEED
PQNEQAYSKL GGSYLMTGDV ESAIYAFQNV TNLNPENGVA WGNIGYLYLV GKEKPDPVPA
LEALTKAVEV KTDDPGIWTN YGIAQLLNTD SESALESFNK AIELMPDGSR AYYWKGITLS
DLGQPEEALT AYEKAIELNP EFKDALYAKG IAESALGKFD EAEATFNQVL TIEGDYSEPF
LTVGSDSDVW DRKGRILFEV RNNPDEALTA FNKAVELNPY NANALYYKGR VLYDQGDLTG
AMEAFTAASE ADPQMGVAHY WKGQVYIDQS DRSGAIAEFR TATELNPNLA DAWYYLGGLL
SDEGSYDEAT TALDKMIELR PDLADPYYLK GLTQYQLENY QDAADSLEQA TALNASQMTE
DDRSKAYYTL GLARVQNEDN QGASEAFAKA VELNATNAVA WNDYGVVLNE LENYEEALKA
FNEAIKISDS EAEYYYNQGT TLVKLDKLDE AIAAFDKAVA IEPSPRAYLA KGLALITQEN
FEEALKAFES AIALDDTKAD LWAQKAFALY KLNKMDEARA AVDKALSYDQ EFKYALDLKE
LIENPEGGNV TPSQSDGETN VTEEVGEGTP ASSS
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