| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0973 |
|---|
| Symbol | |
|---|
| ID | 3923617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1091295 |
|---|
| End bp | 1091903 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637896610 |
|---|
| Product | orotate phosphoribosyltransferase-like protein |
|---|
| Protein accession | YP_502442 |
|---|
| Protein GI | 88602264 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0856] Orotate phosphoribosyltransferase homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.405367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTC AGATGTCTAC CCTGGATGAG TTGATACAAA AAGCACGGCA CCTGCGGAGT
GAAGGTCACA GCCCCGGGCA GATTGCTGAT GAATTGTCCC TCTCTATGGA GACCGTGACC
TGGCTTCTGA CTCAGGAGAA AGGAGCGGCT ACCCCGAAAG ATGTACATAT AGATTGGACT
GCCGTATCCG GCGAATCTCA GCTTTTGGTG GAGAGTGCCC AGATGCTCCT CTCACGGCTT
CATCTGAAAA ACCCTGAAGG ACCCGTTCCC CAGGTGTATG TGGGAATAGC CATATCCGGA
ATTCCGCTAG CAACCCTGAT GGCAGTAACA GAGGGTGTAC GAATTGGTAT TTATCATCCT
GCCAAACATG CCGGAGGAGA TGAACCAATC GGATCCATGA GCGGTAATTT TGACATTCAT
GCCGGAGAGA GAATAGTAGT GGTGGATGAT GTTATCACCT CCGGCAAAAC CTTGCAGGAA
GTAATTAACT ATATCAAAAG GCATGGTGCG GTTCCTGTAG CATGTTGTGT TCTCTTTGAT
AAGCGCGGCA TTCGAGACAT TGACGGCGTT CCGGTTTACA GTCTGTTTAA GGTCTCCCGA
ATAGACTAA
|
|---|
| Protein sequence | MSVQMSTLDE LIQKARHLRS EGHSPGQIAD ELSLSMETVT WLLTQEKGAA TPKDVHIDWT
AVSGESQLLV ESAQMLLSRL HLKNPEGPVP QVYVGIAISG IPLATLMAVT EGVRIGIYHP
AKHAGGDEPI GSMSGNFDIH AGERIVVVDD VITSGKTLQE VINYIKRHGA VPVACCVLFD
KRGIRDIDGV PVYSLFKVSR ID
|
|---|
| |