| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0954 |
|---|
| Symbol | |
|---|
| ID | 3923236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1063106 |
|---|
| End bp | 1064449 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637896590 |
|---|
| Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
|---|
| Protein accession | YP_502423 |
|---|
| Protein GI | 88602245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.539075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.731581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAG ATAAACCATT TACAAAATTT CATAAAAAAA ATAATTACCG GATAAAGAAA
AGGGACGGGG GATTACCAGA AAGCCGGCAG AAGAGTACCA AACAGGTAAA ATATCAAAGA
AAAATTCTGA AAATTCCTTC CCGGCTGGAA CGATTAATTG AAAAATATAT TGAGAATAAA
ACAGGTAAAC CTGTGGATAC TCCAGCAACA CTTGAACGAA TCAGACAATC TATCCTTGCT
CAGAAAGCAG GATACTGGAG TAAAACCCCG CATGCAAAAT ATGGAAGAGG ATATGATGTT
TTCGCATATC TTGCCTACCA GGCTCCGTGT TATATAATTC AATTTCATTA TATCATCCAG
AGACTTGATA AATCCGGAGT TTTTCCAGAG AATATCAGAG TACTTGACCT TGGAACCGGT
CCCGGAGTTG TTCCGCTCGC TCTCACATGG TTTATGAAAG AGAGGAAGAA AGGAACACTC
ACCATTGATG CCATAGAGCA GTCTGAAGAA TTCATAGAGG CTTTTAAATT TCTTGTTCCT
GAATTTGCAT CTGAATCGCC AATAACAACT GACCTTTTAC AGCATGCGGA TATCAGAACA
TGGCAGCCGC AAAACTCTGG TACGTATACC ATGATCACCT GCCAGAATGT TCTGGCTGAA
CTTCCTGGAG AGAGCAGCAA AGAAAAAGCG GACCTCCTGA TAAAATATTG TTCATCATTG
ACAGATGATG GAATTTTGAT TCTGGTAGAA CCGGCAGAAC TTAGACATTC AACTGAATTG
CGTATTCTTC AAAAGAATCT GGAGAAATCA GGATTATTTC TCTATGGTCC ATGCAGATAT
ATCCATCCGG GCCCATGTGA ACCGGAAACA TGCTGGTCCT TTGCAGAACT TTCTGAATTA
AAACCCCCAC GATTGATGGA GTTGTTAAGT GAGGGTCAGG ATGGGTATCG GTTTATGAAT
ACCGATATTA AATTTTCCTA TAGTATCTTC ACTAAAAAAC CACTTGCTCC GGTTTGTCCT
GATTCATTTA TTCAAGGAAC CATACCGCTC GGTGAACTTG AAGATTACCT TGGAGAAACT
GTTACCATTG TTGGAGCAAA GATGTCAATG GACATTGGTA ACCGGGAATT TGCCATTTTT
CTCATATGTG ACGGATCAGG AGGAGCAAAA GTTTATCTTA TTATCCCCCG CTCATTAAAG
AATGAAGAGA TTAAATCGGT AAAAATTGCA GATTATGGAG ATATTTTAAA AATATCAGAG
GTTCGTGTCA GATGGAATCC AAAAAAGGGA TCATTTAATC TTGTTGCAGG TGCACGAACA
CGAGTTTCTG CAATGCATAA ATAG
|
|---|
| Protein sequence | MNSDKPFTKF HKKNNYRIKK RDGGLPESRQ KSTKQVKYQR KILKIPSRLE RLIEKYIENK
TGKPVDTPAT LERIRQSILA QKAGYWSKTP HAKYGRGYDV FAYLAYQAPC YIIQFHYIIQ
RLDKSGVFPE NIRVLDLGTG PGVVPLALTW FMKERKKGTL TIDAIEQSEE FIEAFKFLVP
EFASESPITT DLLQHADIRT WQPQNSGTYT MITCQNVLAE LPGESSKEKA DLLIKYCSSL
TDDGILILVE PAELRHSTEL RILQKNLEKS GLFLYGPCRY IHPGPCEPET CWSFAELSEL
KPPRLMELLS EGQDGYRFMN TDIKFSYSIF TKKPLAPVCP DSFIQGTIPL GELEDYLGET
VTIVGAKMSM DIGNREFAIF LICDGSGGAK VYLIIPRSLK NEEIKSVKIA DYGDILKISE
VRVRWNPKKG SFNLVAGART RVSAMHK
|
|---|
| |