| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0938 |
|---|
| Symbol | |
|---|
| ID | 3923060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1040107 |
|---|
| End bp | 1041336 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637896574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_502407 |
|---|
| Protein GI | 88602229 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1915] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00300] conserved hypothetical protein TIGR00300 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.182607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT CCCGGGAGAT CGAACTCGAC GGGCATATAA TTGATTCTGG GATCATGGAA
CATGTTCTTG ACTCCATCCT TGATATGGGC GGGGACTTTG AGATCCTGGA ATTTTCTGTC
GGAAAAAGAA AAACAGATAC CAGCTATGCC AGAGTGCTTA TTACCGGAAC AGATAACGGA
AATCTGGACG CTATCATCAG CACCCTTCAC CGGCATGGGG CACGGCTGGT AGACACAGAA
GATGTCACTT TGGTTCCAGC TGAAGGGAAC CGGATCGTTC CCAAGGGCTT TTATTCAACA
ACAAATTACC CGACGCAGAT TCGTATCGGC AATGAGTGGA TTCATGTTGA AAATATTGAG
ATGGATTGTC TGATAGTTGT CTCACCTGAT AAAAAATCAG CCAAAGCCAC ACCAATGTCG
AAACTTCAGA AAGGGGATCT CGTTGTCATC GGTGAGCATG GTGTGAAGAT AAAACCCCCG
GAGCGTTCCC GTTCTCATGA GGAGTTTGAA TTCATGGGCG GAGTTATCTC TTCAGAACGT
CCGACAGAGA CAACTATCCG GAAAATTGCC CGGGAAATTA TCGACACCCA TAAAAAAGGG
TTAAAGGTAG CTCTGGTAGG AGGGCCTGCA ATTATTCATA CCGGCGCTGA CGAAGCCTGT
GCATCCATGT TCAGAGAAGG GTATATTGAC ATTCTCTTTG CGGGAAATGC CCTTGCCACT
CATGATATTG AGTATAATTT ATTCGGTACT TCGCTTGGTA TGAATATCCG GTCAGGTGAA
CTGGTTTCTG CCGGGCACAA AAATCATCTC TATGCTATTA GTGAAATCAT GCGAGCTGGT
TCGATCAGAA AAGCGGTAGA AACAGGGATT TTGGGATCAG GAATCATGTA CGAATGCATA
AAAAGGAATG TTCCCTATGT CCTTGCCGGC TCTATTCGGG ATGACGGACC CCTTCCTGAT
GTCATCACCG ACGCGATGGT TGCCCAGGAT GAGATGAGAC GATATGTCCC TGAAATCGGG
ATGGTCCTCA TGATTGCAAC GATGCTGCAT TCGATAGCAG TCGGGAACTG TCTCCCATCA
TATGTTATGA CCGTTTGTGT TGATATAAAT CCGTCAACAC TTACCAAATT GATGGATCGG
GGTACCTCTC AGGCGATCGG CGTTGTAAGT GATGCAGGAG CTTTTTTCCC CATGCTCCTT
GATCAACTCC ATCAGATACA GAAAAAATAA
|
|---|
| Protein sequence | MTDSREIELD GHIIDSGIME HVLDSILDMG GDFEILEFSV GKRKTDTSYA RVLITGTDNG
NLDAIISTLH RHGARLVDTE DVTLVPAEGN RIVPKGFYST TNYPTQIRIG NEWIHVENIE
MDCLIVVSPD KKSAKATPMS KLQKGDLVVI GEHGVKIKPP ERSRSHEEFE FMGGVISSER
PTETTIRKIA REIIDTHKKG LKVALVGGPA IIHTGADEAC ASMFREGYID ILFAGNALAT
HDIEYNLFGT SLGMNIRSGE LVSAGHKNHL YAISEIMRAG SIRKAVETGI LGSGIMYECI
KRNVPYVLAG SIRDDGPLPD VITDAMVAQD EMRRYVPEIG MVLMIATMLH SIAVGNCLPS
YVMTVCVDIN PSTLTKLMDR GTSQAIGVVS DAGAFFPMLL DQLHQIQKK
|
|---|
| |