| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0929 |
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| Symbol | |
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| ID | 3924616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1030050 |
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| End bp | 1031144 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637896565 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_502398 |
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| Protein GI | 88602220 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00399276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTGCG GTATCGTGTA TGCTCCATCA TATCTGACTC ATGAACAGAG TTCATCACAC
CCTGAACGAC GTGAACGCTT ATCATACACT CTTGACCAGC TTGAAGAGGA GGGAATCTTT
GATCTCCCTC AGATACGTCT TCTGACCCCA AAGCCTGCGA TGAGAGATGA TGTGCTCTTA
GTCCATACGA AGGAATATCT GCATTTTCTT GAAGAAGCCT CAGTCAACGG TGCTATAATA
GATGCAGATA CCTATGTACC AAAAGGATTG ATTCATGATG CACTTCTCGC AGCAGGGGGA
GCAATAACCG GTGCAGATGC AGTACTGAAC CAGGAGGTAA GGAATTCTTT TGTCCTGTCA
CGGCCGCCCG GGCATCATGC AGGACGTTCA CATGGGGCAG GTTTTTGCTA TCTCAATAAT
GTTGCCATAA TGGTTCGGTA TCTTCAGCGC AGGGGCCTTA GGAGGATTAT GGTCCTTGAC
TGGGATGCAC ATCATGGAAA TGGAACAGAA GAGATCTTCT ATGATGATCC TTCAGTCCTT
TTTTGTTCAG TACATCAATA TCCCTTTTAT CCCGGGTCCG GACGATTTGA GGATATCGGG
ATTGGTGATG GCAAAGGATA CAATATAAAT CTCCCAATTC CAGCTGGGAG TTCAGATAAG
GTCTATCGGT ATCTTCTCGA GGAGATCATT CTTCCTCTGG CTGATGAGTA CATGCCAGAT
GCCATTGCAA TTTCTGCAGG TCAGGATAAT CATTTCACTG ATCCCCTAAC CGGACTTGCA
CTGACCGCGC AGGGGTATGC TCGTCTTATG CAGGAGATGT GCATTCTTGC CGATTCTATC
TGTTATGGGA GAATTATTGC TGTCCTTGAA GGAGGATATA GTGTTGAAGG AGGTCTCCCG
TACACGAACC TTGGTCTTAT TGCAGCAATG GCTGGTCTGG ATATATCTGC TATTCGAGAG
CCTGAAATAT ATCGGGAGGT ATTAGAGAAA GCAGTATCTG ATGAAGCCTT TCCGATTGTA
ATTAAGATGG TCACTGATCT TAAGAAAAAG CTGGCAGATC ACTGGTATTT TATCCGTCAA
TATAATTTCA GGTAA
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| Protein sequence | MTCGIVYAPS YLTHEQSSSH PERRERLSYT LDQLEEEGIF DLPQIRLLTP KPAMRDDVLL
VHTKEYLHFL EEASVNGAII DADTYVPKGL IHDALLAAGG AITGADAVLN QEVRNSFVLS
RPPGHHAGRS HGAGFCYLNN VAIMVRYLQR RGLRRIMVLD WDAHHGNGTE EIFYDDPSVL
FCSVHQYPFY PGSGRFEDIG IGDGKGYNIN LPIPAGSSDK VYRYLLEEII LPLADEYMPD
AIAISAGQDN HFTDPLTGLA LTAQGYARLM QEMCILADSI CYGRIIAVLE GGYSVEGGLP
YTNLGLIAAM AGLDISAIRE PEIYREVLEK AVSDEAFPIV IKMVTDLKKK LADHWYFIRQ
YNFR
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