| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0913 |
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| Symbol | |
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| ID | 3924139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 1017448 |
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| End bp | 1018290 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637896549 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_502382 |
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| Protein GI | 88602204 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.249159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTGA AGACACCTCT CCATCTCTTC ATACTCCTGT CTTTAGTTTT TTTCTTTTTA
CCCGCAAGCC ATGCAGCGAA TACCAGTACT GACCCTGCAC CTGGAATAGA TCTGATACAG
AACGGTTCTT TTAAGGAAGG ACTGGCCATC CTGGAGGAGT ATGTCAAATC CAATTCTACA
AATCCGGAGG CTTGGAATTC AATAGGATAT GCTCTGAATA ATCTGGGCCG GTTTCGTGAT
GCAATACCTC CCCTTGAGAA TGCCACCAGA TTAGAACCCA ATCATACGAT TGCCTGGACA
AACATGGGAT GGGCATATAA TGAACTTGGA GATTATGAAA AAGCGCTGGA GGCTTTGGAG
ACTGCAACGA GAACCGGCCC GGACAATAAA TATGCATGGA GTACAAAAGG ATATTCACTT
ATCAGGACTG GTGCACTTAC AGAAGCTATT TCTGTTCTGA ATAAAGCCCT TGAACTGGAT
GCTAATTTTT CAGATGCATG GAATAACCTG GGATGGGCTT ATGCAGAAGA TAAGAGATAT
GATGAAGCAG TAGAGGCACT TTCCAAAGCG ACCAGTCTTG ATCCTGAAAA TGGATATGCA
TGGAATAATT TTGGAAGGAT CCTCTATCTG ACAGGGCGAA CAGAAGAAGC ACGGGATGCC
TTATATAATG CAACACAGAC TAAACCTGAA TTTGACCAGG GATGGTATAA TCTTGGAAAT
GTGCTCTATG CAATGAAATC ATATAATGAA TCCATTGAAG CATACCGAAA GGCAGTTCAG
CTGAATCCTG ATAACCAGAT AGCACGTGAA AATCTGGAGA TTCTAGAAAA ATTATTCATA
TAA
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| Protein sequence | MFLKTPLHLF ILLSLVFFFL PASHAANTST DPAPGIDLIQ NGSFKEGLAI LEEYVKSNST
NPEAWNSIGY ALNNLGRFRD AIPPLENATR LEPNHTIAWT NMGWAYNELG DYEKALEALE
TATRTGPDNK YAWSTKGYSL IRTGALTEAI SVLNKALELD ANFSDAWNNL GWAYAEDKRY
DEAVEALSKA TSLDPENGYA WNNFGRILYL TGRTEEARDA LYNATQTKPE FDQGWYNLGN
VLYAMKSYNE SIEAYRKAVQ LNPDNQIARE NLEILEKLFI
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