| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0833 |
|---|
| Symbol | |
|---|
| ID | 3922284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 941520 |
|---|
| End bp | 942515 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637896470 |
|---|
| Product | replication factor C small subunit 2 |
|---|
| Protein accession | YP_502304 |
|---|
| Protein GI | 88602126 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0470] ATPase involved in DNA replication |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.304305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0467455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTGGA TTGAAAAATA TCGTCCGGTC ACTTTTGACC AGATACTTGG TCAGGAACGG
GTGTGTGAAG TGCTCAGGCG ATGTGCCGCA ACAAAAAACC TCCCACATCT CGTAGTATCC
GGCCCACCAG GAACAGGGAA GTCAGCAGCG GTTGAGGTTA CCCTGCGTGA ATTATACGGA
GATACCTGGC AGGATAATGT AACCATCTTC AGGACCTCTG ATCTTATGGA ACGGGGGAAA
TATGCGCTTG AATCAGATGA ACGGTTTTTA CATCTGTACC GATCTGATGA ATCATTTCTG
TCAAACTTCA AACATATCAT CTCTTCCTAC GCTTCCATCC GACCGATTAA TGCAGAGTTC
AAAGTAATGT TGTTTGAAGA TGCCCATGCG TTATCACATG ATATCCAGCA TGCTCTCCGC
CGGACCATGG AACGGTATAG CAATACCTGC CGGTTTATAT TTTGTACAAC ACAGGCATCA
ACCCTCATCC CTCCGATTAA ATCCAGGTGC CTGCCTCTCT TTTTCACCCC CTTATCCCGT
GATATAATCC GGGACTGCCT GAATACGATT CAGAATGATA TTCCAGAACC TGATCGCGTC
TCTGATGATG AGACCGGCCT TATTGTTGCT GCAGCAGGCG GGGATTTGAG AAAGGCAATC
ATGTATCTGC AGGTCAGGGT GGAGACGAAA ATCCCTTTCA ATCCTGATAC CTTAAGCAGG
ACTGATACCC AGGAAGAGGC CTGCCTTGCA CTTCATGCTA TGAAAGCAAA AGATATTGTC
GCGGCCCAAA AACGGCTGCA GGATCTTATG ATTACTCAGG GACTGTCTGG CAGAGAGATT
ATCTCCACCC TTCTCCAGGT CACTGAACGC GAATATAATG ATCCGGAGAT TGTGACAAGG
CTTGCCGATA CTGATGCCCG TCTGACCCAT GCAGGAAATG AATATCTGCA GGTCAATGCC
ATGGTAGCCA CCATCGTTGC GGAGGTGTTT TCATAA
|
|---|
| Protein sequence | MFWIEKYRPV TFDQILGQER VCEVLRRCAA TKNLPHLVVS GPPGTGKSAA VEVTLRELYG
DTWQDNVTIF RTSDLMERGK YALESDERFL HLYRSDESFL SNFKHIISSY ASIRPINAEF
KVMLFEDAHA LSHDIQHALR RTMERYSNTC RFIFCTTQAS TLIPPIKSRC LPLFFTPLSR
DIIRDCLNTI QNDIPEPDRV SDDETGLIVA AAGGDLRKAI MYLQVRVETK IPFNPDTLSR
TDTQEEACLA LHAMKAKDIV AAQKRLQDLM ITQGLSGREI ISTLLQVTER EYNDPEIVTR
LADTDARLTH AGNEYLQVNA MVATIVAEVF S
|
|---|
| |