Gene Mhun_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0807 
Symbol 
ID3924349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp917747 
End bp918427 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID637896444 
Product5-amino-6-(5-phosphoribosylamino)uracil reductase 
Protein accessionYP_502278 
Protein GI88602100 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.185302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.290078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC ATATAAACCG CCCTTATGTT ACCCTGGTAT CAGAAGTGAC AATTGATGGA 
AAACTCACAG TTACGAGGGG CGCTTCATCA AAGCTCCTGA TGCAGTTTAT GTCTCATGAG
GCTGAAGTAC TGCTCCATCA GATCCGGGCT GATTCTGATG CAATCATGGT CGGGGCAAAT
ACCATCCGGA TAGATAACTC ATTTCTGACC GTCAGACATG TAGAAGGTAA AAATCCAATC
CGGGTCATTC CGTCTTCAAA AGCAGATATA TCTCCGGATG CAAATGTCCT CTCACCTGAT
GCACCAACCA TTATCGCAGT ATCTGCACGG GCAGATAAGG AAACGTGTAC GATTCTGGCA
GAAAAGGGTG CTTACATAGA GATCTGTGGA GATGAATTCG TGGATCTTCC TATTCTGATG
CGCTTACTCT TTGAAAAATA TTCCGTGCAA TCCCTGATGA TAGAAGGAGG GTCTACCCTG
AATGGCAATA TGTTCCAAAA AGGCTTAATC GACGAACTTC TGCTCATTCA TCTTCCCTTC
ATTGCTGGAG GAGAGGATAC GCCCTCACTG GTCACCGGCC TTCATCCCCG TGATGTATCA
GATCTTCTGA AACTGGATCT CATTACTCAC TTCATGGCTG GTGAAAACCT TATCACAAAA
TGGCGTGTGG TCAGATCCTG A
 
Protein sequence
MSDHINRPYV TLVSEVTIDG KLTVTRGASS KLLMQFMSHE AEVLLHQIRA DSDAIMVGAN 
TIRIDNSFLT VRHVEGKNPI RVIPSSKADI SPDANVLSPD APTIIAVSAR ADKETCTILA
EKGAYIEICG DEFVDLPILM RLLFEKYSVQ SLMIEGGSTL NGNMFQKGLI DELLLIHLPF
IAGGEDTPSL VTGLHPRDVS DLLKLDLITH FMAGENLITK WRVVRS