| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0782 |
|---|
| Symbol | |
|---|
| ID | 3924000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 898569 |
|---|
| End bp | 899309 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637896419 |
|---|
| Product | glutamate synthase, alpha subunit-like |
|---|
| Protein accession | YP_502253 |
|---|
| Protein GI | 88602075 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0070] Glutamate synthase domain 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00542084 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.210269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTA TTACTATAGA TGCTGCAGGA ATTCACTATA CTCCGCTCAA TAAACAGATC
AGGCAGGCTG TCCGCGACGG AGTCTCTGAA ATAATTTTAA AAAATGTCAT GGGACAGCGT
TTTATCGGAG ATGGGCTTAT CGGCAATGTA AAAATTACCA TTCATGGAGT ACCCGGAGGC
GATCTTGGGA TGTTCATGAA AGGGCCCACT ATTGAGGTAT TCGGGAATGC AGATCACGCA
CCTGGAAATA CCATGGATGA AGGTACAATT ATCATTCACG GTGCCAGTGG TGATGCAACC
GCTCATAGCA TGAGGGGAGG GAAAGTCTTC ATCCGGGATG ATATCGGCTA CCGTGGCGGA
ATTCACATGA AACAATATCA GGATAAACGT CCGGTCCTGA TTATTGGAGG GACTGCCAAG
GCATTCTTAG GAGAATATAT GGCTGGCGGA CTTGTTATCA TGTTCCGGAT GCAGGATGAA
GAACCATATG CAGAGATGGG GCTCGCAAGC GGTATTCATG GTGGTGAAAT TTTCATAAGA
GGGTCAGTTG AAGAATGGAC ATTGGGTATC GGAAGTAGTG CGAGACCGGC AACATCAGAG
GATATTGATA GAATAAAATC ATTCATCTTT GAATTCTCTC AATATTATGG CAATGACCCT
GCGAAATTGA TGAACAGCTC CTATACCCGG ATAGCACCCG TGAGTGCCCG GCCATTTGCC
GGTAAATATA CCTGGGAGTG A
|
|---|
| Protein sequence | MTTITIDAAG IHYTPLNKQI RQAVRDGVSE IILKNVMGQR FIGDGLIGNV KITIHGVPGG
DLGMFMKGPT IEVFGNADHA PGNTMDEGTI IIHGASGDAT AHSMRGGKVF IRDDIGYRGG
IHMKQYQDKR PVLIIGGTAK AFLGEYMAGG LVIMFRMQDE EPYAEMGLAS GIHGGEIFIR
GSVEEWTLGI GSSARPATSE DIDRIKSFIF EFSQYYGNDP AKLMNSSYTR IAPVSARPFA
GKYTWE
|
|---|
| |