Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0760 |
Symbol | |
ID | 3923530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 875226 |
End bp | 876509 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637896396 |
Product | S-layer-like domain-containing protein |
Protein accession | YP_502231 |
Protein GI | 88602053 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1361] S-layer domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0390726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.722575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAGTA TACATCATAC AAAGATTATT ATGAAGACGA GCAAAAACCA CACAAGAACA AAAGTACACA GATATGCGAA AACAGGAACG TTTATTCTTC TCGCTCTTGT CTGCATGCTC CCCCTGGTAT CTGCCGCACC TCAGATATCA GTTATTGTTG CTGATTACAA AGTATCTCCG GCAGTTCTTC TACCAGGGGA AGAGGGTACT CTGACGGTCA CTCTAAAGAG CGTTGCAACG GGTACAACTA CCAGTTCAGT ATCATATGGA CAGGATATAA GTCAGACAAC ATCCAGTATC ACGCCATATA TTGACAGTGT GGTCCTGAAA TCCAAAGACT TTGACATATT GGGAGGAGAC TCAAAGTTTG AAGGAAATAT CGGCCCTGAC CAGCCGGTTC CCGTTACATT CCTGATTCGT GCACCACAAC GAAGCGGGAT GTATTTCCCG GAAGTCTGGA TTCGGGTACG TGATGGTCAA AGTCTGAAAT ATCCGGTTCC GGTCAATGTC AACACCCAGT TATCAGTTTT GAAAACCCCA TCTCTTGCAC TTGAAAACAC ATTTCCGATA CCGGTGAAAC CTGGAACAAA AGTTGAGGGC ACCATCAGAA TTTCAAATGA AGGTTCAACG CAGGCAGATA ATATCCGTGT TTTTGTGAAT GGCAGTCCGC CCATGGCAAT CCCGGCAGGA ATCAGTTCAT TCATGATTGA TAGACTTGCA TCAGGCATGT CAAAAGAAAA GAACCTCTCT CTTCTCATTG ACAAGAACAC TCCGACAGGA ATCATCGAGG TACCGGTCCG AATGACCTAT GCTCTGCTTG ATGGTACTAT TATTGAAGAT ACCGGATCTA TAGGGCTTGA TGTCAGAGGG GAATCTGAGA TCAGTATCAC CTCTGTTGAG ACAACGCCAT CCAGAGTAAA CCCTGGTGAA CCATTTAATC TCATCATCAG GGTTCAGAAT ACCGGAACTG GTGAGGCGAA ATCAGTCAGT GCAACGATTG ATCTCCCTAT CCAGGGAGCA AAAGAGGCTT TTATCGGACG TATTAAATCA GGAAATGATG CTCCTGCCAC ATTTGTTCTT GAAGGAACTG AAGCGGGAGA GTACACCTAT CACACAACCA TTACCTATAC TGATGACTGG GGCACCCATA CCCTCGATAA GGATCTCATC CTTACCATTG CATCCGGTGG CGATTCATCC GGAATGATTA TCCTGATCCT GCTTATTGTC ATTGCCTGTG CAGGGGGATT TTTGTACATG AGGCATAAAA ACGAGGATGA CTGA
|
Protein sequence | MNSIHHTKII MKTSKNHTRT KVHRYAKTGT FILLALVCML PLVSAAPQIS VIVADYKVSP AVLLPGEEGT LTVTLKSVAT GTTTSSVSYG QDISQTTSSI TPYIDSVVLK SKDFDILGGD SKFEGNIGPD QPVPVTFLIR APQRSGMYFP EVWIRVRDGQ SLKYPVPVNV NTQLSVLKTP SLALENTFPI PVKPGTKVEG TIRISNEGST QADNIRVFVN GSPPMAIPAG ISSFMIDRLA SGMSKEKNLS LLIDKNTPTG IIEVPVRMTY ALLDGTIIED TGSIGLDVRG ESEISITSVE TTPSRVNPGE PFNLIIRVQN TGTGEAKSVS ATIDLPIQGA KEAFIGRIKS GNDAPATFVL EGTEAGEYTY HTTITYTDDW GTHTLDKDLI LTIASGGDSS GMIILILLIV IACAGGFLYM RHKNEDD
|
| |