| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0758 |
|---|
| Symbol | |
|---|
| ID | 3923528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 873305 |
|---|
| End bp | 874018 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637896394 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_502229 |
|---|
| Protein GI | 88602051 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0209945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.958202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCG CAGAGAACCT GACCAGAGTG TATGATATGG GAAAAGTGAC GGTTCATGCA
CTCCGGGGAG TATCCCTTAC CATACAGAAG GGTGAATTTG TCGGTATCAT GGGTGCAAGC
GGATCTGGAA AGTCCACCTT ACTCCATCTG CTCGGTCTTT TGGACAGACC AACAGAAGGG
AAGATACTTC TTGGCGGTAT TGATGTCAGG ACCTTAGACG AACGACAAAG AACGCGGTTC
AGGCTGAAGA GACTGGGTTA TGTGTTTCAG GATTATGCTC TCGTGCCTGA ATTAACCGTC
GAAGAGAACG TTTATCTGAC ATCAATGATC CGGGGAACTT CAAAGGAAGA GTACCAGGCA
CAGACATTAC AGATTCTTGA CCGGATTGGT CTATCAGATC GGCTGACTCA TAAGCATAAT
GAGCTCTCAG GAGGACAGCA GCAACGAGTG GCCATTGCAC GGGCGATGGT GAATAAACCG
GAGATCCTCT TTGCAGATGA ACCATGTGCA AATCTTGATT CAGAGAGTTC AAGAAACGTG
CTTGATCTCT TTAAACAGAT TAACAAGGAG ATGGCCCAGA CGATTGTGAT GGTCTCCCAT
GAGGACTGGC ATATGGAGTA TTTTGACCGG GTGATAATCC TTCGTGACGG AAAAATTGTA
TCCGATGGTC CTCCACCGGA AGAGATTTTG GAAAAAGCGT GTAAATATAA GTGA
|
|---|
| Protein sequence | MIIAENLTRV YDMGKVTVHA LRGVSLTIQK GEFVGIMGAS GSGKSTLLHL LGLLDRPTEG
KILLGGIDVR TLDERQRTRF RLKRLGYVFQ DYALVPELTV EENVYLTSMI RGTSKEEYQA
QTLQILDRIG LSDRLTHKHN ELSGGQQQRV AIARAMVNKP EILFADEPCA NLDSESSRNV
LDLFKQINKE MAQTIVMVSH EDWHMEYFDR VIILRDGKIV SDGPPPEEIL EKACKYK
|
|---|
| |