| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0735 |
|---|
| Symbol | |
|---|
| ID | 3923162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 845516 |
|---|
| End bp | 846511 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637896372 |
|---|
| Product | CRISPR-associated Cas1 family protein |
|---|
| Protein accession | YP_502207 |
|---|
| Protein GI | 88602029 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0403946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.187894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGG TGCTGATTAC AGGTGCCGGC TATCGAATTC GCAAGCGTGG GGATGTGTTG
ACGATTGAAA CGGGGAAGGA TAGTGATACT GCTGAACCTC CCAGGACCCT CTCACCACTT
GGTCTTGACC TGCTGGCAAT AGCGGGCGAT CACTCAATTT CCACTGCTGC GGTTCGTCTG
GTAACCTCTC ATGGTGGGGC CATTGCACTC ATGGACGGAC TAGGAAATCC TTTTGGACAT
TTTCTCCCTC TTGGAAGATC TGCTCTCATT GAACAATATG AGGCTCAGGC TTCTGCTCCG
GAGGAGAGAA GACTTGAGAT TGCCCGGTCG ATATGCACTG GGGCACTGGA GAATAAACGA
ACGCTTCTTT CAAATCTTGA ACGTATCCGT GGATTTGATC TCTCACGAGA GATTAGACTT
GTTGAGGATG CACAGGATAA GGCTCTCGAA TGTCAGAGTC TTGATAGTCT CCGGGGCGTA
GAAGGATCAG GTGCTCATGC GTATTTTCAG GGTTTTTCAT TGGCTTTTGA TGAGGAATGG
GGTTTTTTGG GCAGGTCGCA GAATCCTGCA ACTGATCCAG TGAACAGTTT ACTCAGTTAC
GGATACGGGA TGCTCTATAT TCAGGCCAGG CAGGCACTGG TGCTGTCAGG GTATTCTCCT
TATTATGGGG CATATCATGA AACATATAAA AAGCAGGAGG CACTGGTATA CGATCTGGTT
GAGGAGTTCA GACAACCAGT GGTTGACCGG ACCGTTGTGA CATTTCTTGC TAAACATATG
GCCACACCTG ATGATTTTAC CTATCCAGAT GAGGGTGGTT GTATGATCGG AACGATGGCA
AAGAAGAAGT ATGCAGCTGC TGTACTTACT CGAATACATG GGAAAGTAAA ATATGAAGAA
CAAACATTTC AGGATATTTT CAAAAGGCAG GCGGAAAGGA TTGGAAAAGC ACTGACTGAA
GGGGATGAGT ATGTTCCGTA CCGGTACCGG ACATGA
|
|---|
| Protein sequence | MNSVLITGAG YRIRKRGDVL TIETGKDSDT AEPPRTLSPL GLDLLAIAGD HSISTAAVRL
VTSHGGAIAL MDGLGNPFGH FLPLGRSALI EQYEAQASAP EERRLEIARS ICTGALENKR
TLLSNLERIR GFDLSREIRL VEDAQDKALE CQSLDSLRGV EGSGAHAYFQ GFSLAFDEEW
GFLGRSQNPA TDPVNSLLSY GYGMLYIQAR QALVLSGYSP YYGAYHETYK KQEALVYDLV
EEFRQPVVDR TVVTFLAKHM ATPDDFTYPD EGGCMIGTMA KKKYAAAVLT RIHGKVKYEE
QTFQDIFKRQ AERIGKALTE GDEYVPYRYR T
|
|---|
| |