| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0637 |
|---|
| Symbol | |
|---|
| ID | 3923089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 738549 |
|---|
| End bp | 739208 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637896276 |
|---|
| Product | TrkA-N |
|---|
| Protein accession | YP_502112 |
|---|
| Protein GI | 88601934 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0432302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA TCATCATCGG ATGTGGCCGT ATGGGGTCAG GACTTGCCAT GCGTCTTGTA
CGGTCACATC ATGAAATTAC GGTAGTGGAT CATGATCACC GGGCATTTGA CCGTCTTGGG
GCAGGATTTT CCGGAATGAT AATAGAACAT GATGCCATGG ACAAAAAATC ATTTACGATG
AGTGGGGTAG AAAAGGCAGA TGGACTTGCC GCAGTAACCG GAAATGATGC AGTGAATATT
GTCGTCGCCC GTGCGGCAAA ACAGATGTAC CGGGTTCCAA AGGTGATTGC CCGAACTCAT
GATCCCCGAT ATGCAGAGCT GTATCATAAA TTGGGTATTG AGACGGTCAC CAATGTAACT
CTTGGTATAG AACGGATATC AGAACTTCTG ACATTTTCAA CTCTTGATAT TATTCATGGA
ATCGGAGATG GAGAAGTAGG CATAGTCAGA TATGATATTC CTCCGCTCCT TGCCGGACAT
CAGGTGAAGG ATCTGACTGT CCCGGGTGAG ATCATTGTCT TGTCACTGAC CAGGAAGGGG
AAGACCAGCA TTCCAACCCT TGGAACTACA CTGGAAAAAG GTGATGTGGT TCACATTGCC
GTGGAAGAGC GGGCTGTTGA CCGGTTAAAG AATGAAATGC GGACCGTCGG AGGTGGATAA
|
|---|
| Protein sequence | MKIIIIGCGR MGSGLAMRLV RSHHEITVVD HDHRAFDRLG AGFSGMIIEH DAMDKKSFTM
SGVEKADGLA AVTGNDAVNI VVARAAKQMY RVPKVIARTH DPRYAELYHK LGIETVTNVT
LGIERISELL TFSTLDIIHG IGDGEVGIVR YDIPPLLAGH QVKDLTVPGE IIVLSLTRKG
KTSIPTLGTT LEKGDVVHIA VEERAVDRLK NEMRTVGGG
|
|---|
| |