| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0633 |
|---|
| Symbol | |
|---|
| ID | 3923085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 732260 |
|---|
| End bp | 734044 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637896272 |
|---|
| Product | TrkA-C |
|---|
| Protein accession | YP_502108 |
|---|
| Protein GI | 88601930 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0927115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0519918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCGG TAACAGCTGA TCAGATAATC GTTTTTGTTA TCCTCATCCT TTCTCTTGCT
CTCTTTATCG ATGGGAGAAT GCGATATGAC ATCGTTGCTC TTCTTGCGTT GTGTGTATCC
GCAATTCTGG GAGTAGTTCC CTGGACCCAG ACATTTTCCG GTTTTGCAAA TCCGGCAGTC
ATCACTGTAG CTGCAGTTCT GGTGATCAGC CGGGGACTTT TGAATGCCGG AGTGGTGGAG
ATGATTACAG GAGCTCTTAT GAAGGTTGGA AAACGGCCAA CCATCCAGGT CTCTGCACTC
ACCGGCCTTG TTATCACACT TTCAGGGTTC ATGAATAACG TTGGAGCCCT TGCCCTGCTC
ATGCCGGTGG GAATTAAAAT GGCACGATCC AGCCTGGTAC CGGTTTCCAT CCTTCTCCTC
CCACTTGCAT TTGGATCACA ACTGGGCGGG ATGATCACCC TTATTGGAAC ACCGCCAAAC
CTTATCATCT CAGCATTTCG GGAGGAACAT CTCGGGCAGG CCTATGCCAT GTTTGATTTT
ACCCCGGTGG GTCTTGGGGT TGCGTTCATC TCTTTCCTCT TTATCGCCCT GATCGGATGG
CGACTGGTAC CAAAACGAAC CGGACCAGGT TCACTGGATG ATTTTTTCAC GATTCAAAAT
TATCTTACGG AGATACGGGT GCCACCTGAA TCAAAATATG CCGGGAAGGC ACTTCGGGAG
ATCATTAAGG CAACCAATGC AAAAATTACC ATTATCCAGC TTATCCGGGG ATCATTTGCA
CGACCGGTCC CGTACATGTA TGAACGAATA AAAGCCGATG ATATTCTGAT AGTCCAGGCA
GCTCTTGATG ATCTGAAAAA ATTTCTTCTT GCAACCGGGT TTCAACTTGA GGAACATGTC
ACGTTAGACC GGGAAACTAT TGAATCTGGT GACAGGATTC TGATGGAGGG CACGATCAGG
GCTGATTCTC CAGCTTTGGG TTTGAATGTG AGAGATATCG ATCTCAGGGC AGGTTTCGGA
ATTAATCTTC TTGCAGTAGC AAGACAGGGA GTTCTTCTCA AGGAACGGCT CAATGATATC
AGGTTTCAGG CCGGTGATGT CTTATTACTT CAGGGAACCG AGGGAGCACT TCGGGAAGCT
ATCAAAATTC TCGGGTGTTT CCCTCTTGCA GAGCGGGGCC TCAAGATTGG AGAGCCAAAG
CGGATCATCG AATCCGTCGG TATCTTTGCC GGTACAATCG TGATTGCAGC TCTCGGGATT
GTTCCGGTTC AGGTCATCTT TACTCTTGCT GCATTGCTGA TGGTCCTCAT TTCCCTTGTT
CCGGTCAGGG AGATTTACGA GAGTATTGAC TGGCCGGTGA TCATCCTTCT TGGTGCATTT
ATTCCGGTTG GTCAGGCCAT GGAGGAGACC GGCGGAGCAG AACTGATAGC ATCAACGTTG
TTATCATTTC AGAATCTTCT TTCACCGGTG ATCCTGCTTA CAATTATCCT TATCGTGACC
ATGCTGCTTT CAGCCCTCAT CAATAATGCC GCAACTGCCG TCCTGATGGC TCCGATATCA
TTTAGTATTG CAACCGGTCT TGGGGTTTCG CCGGATCCCT TCCTGATGGC TATCGTGGTT
GGAGCCTCCA GTGCTTTCCT GACTCCGGTG GGTCATCAGT CGAATGCTTT GGTTATGGGT
CCGGCCGGGC TCAAATTCGG GGATTATTGG AAACTCGGGC TACCGCTCGA GATAGTAATG
GTTATTGTTT CGATTCCGGT GATACTTCAT TTCTGGCCAA TGTGA
|
|---|
| Protein sequence | MMSVTADQII VFVILILSLA LFIDGRMRYD IVALLALCVS AILGVVPWTQ TFSGFANPAV
ITVAAVLVIS RGLLNAGVVE MITGALMKVG KRPTIQVSAL TGLVITLSGF MNNVGALALL
MPVGIKMARS SLVPVSILLL PLAFGSQLGG MITLIGTPPN LIISAFREEH LGQAYAMFDF
TPVGLGVAFI SFLFIALIGW RLVPKRTGPG SLDDFFTIQN YLTEIRVPPE SKYAGKALRE
IIKATNAKIT IIQLIRGSFA RPVPYMYERI KADDILIVQA ALDDLKKFLL ATGFQLEEHV
TLDRETIESG DRILMEGTIR ADSPALGLNV RDIDLRAGFG INLLAVARQG VLLKERLNDI
RFQAGDVLLL QGTEGALREA IKILGCFPLA ERGLKIGEPK RIIESVGIFA GTIVIAALGI
VPVQVIFTLA ALLMVLISLV PVREIYESID WPVIILLGAF IPVGQAMEET GGAELIASTL
LSFQNLLSPV ILLTIILIVT MLLSALINNA ATAVLMAPIS FSIATGLGVS PDPFLMAIVV
GASSAFLTPV GHQSNALVMG PAGLKFGDYW KLGLPLEIVM VIVSIPVILH FWPM
|
|---|
| |