| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0487 |
|---|
| Symbol | |
|---|
| ID | 3923763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 563690 |
|---|
| End bp | 564925 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637896127 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_501968 |
|---|
| Protein GI | 88601790 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.168849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCGA ATAAACAAAA TAAAATTCAT GCAAACATCC AATGTGGAAC AACCGGAATG
AAGCAATCCT GTATTTTAGA TATCAATATT AATTGCAGGC ATATTTCCGT TGCCGGCTTT
CTTATGCTCA TCCTGCTTTG CTGCATTGTT CCGGTTTCTG CTCTTGAACC AGAGAAGGCA
AAAATTACTA TCGGAGTCAT TCTTCCATTG AGCGGCGATG ATAGTGTGGC CGGTTCTCAT
CTTCTTCAGG GTATTCAGGT TGCAGCAGAT GAGATAAACG CTGACGAAAC ATGCAGATAT
CAGGTAGATC TCCAGGTTGC TGATGATACC GGAGACCCGG ACAGAGCATT GACTCTTTTC
AAGGAGATGC AGACCGATTC TATTCCTGTG GTTATCGGAT CCTATACAAC TACCCTGACC
CTTCCGATGG CACGGGAAAC CGGAAAATCA GATACCACGC TCCTCATATC CCCCCAGGCG
AACGGAGAAT CTCTTTATGG CATATCACCG CTCTTTTACC AGGTCAACCC TCCGATATTC
GCCCTTGCAC AATTTGTTTC AGAATGGCTG GCCTACACAT CAGACCGTCC TGCCCTGGTG
TATGTTCAGG ATAAATACGG AGAATCGGTC CTGAATCACA TCCTAAAGGG CCTAATAGAG
CAAGATTTCC AGATTTCAGG GACATACCCG GTTCTCCCGG AGGAGAATGA TTTTTCATCA
TTTACCCGGA CAATCCTCGA TAAAGCTCCG GATGCGATTG TCATCATCAT GTATGATACA
CGGCAGATTC CTCTTATCCG GAATATTTCT GAAGCAGGAT ACCGGGGACA GGTATTATTG
ACCGAATCAT CATGCCTTGA GAATCTGGAG AAAGAAGAGA CTGATGCACT CTCCCGGTTT
CCCCTGTTTA CCATCTCTGC CTACACAAAT CTCGTGCCAG GCGACCACTC TGACCGGTTT
GTTCAGTCAT ACCAGGAGGC ATTTGGGAAT GATCCGTCGA AAACCCTTGC AGGATATGGG
TATGATTCCA TGATGCTTAT CGCCGATGCA TTCAGGAATG GAAACGGAGA GGAGAATATC
ACGGCTGAAA TGATCAAAGA GGGTCTTGAT AACTCCAGAT ACTATGGGGT GACCGGCCCG
AAGATTTTTG ATATGAATCA TGCACCTACC AGTGCTATGG ACCGGTGGGG ATTTAAGGAT
GGAAGATTTG AACTCATGAC CATTTCACTG GTCTGA
|
|---|
| Protein sequence | MHPNKQNKIH ANIQCGTTGM KQSCILDINI NCRHISVAGF LMLILLCCIV PVSALEPEKA
KITIGVILPL SGDDSVAGSH LLQGIQVAAD EINADETCRY QVDLQVADDT GDPDRALTLF
KEMQTDSIPV VIGSYTTTLT LPMARETGKS DTTLLISPQA NGESLYGISP LFYQVNPPIF
ALAQFVSEWL AYTSDRPALV YVQDKYGESV LNHILKGLIE QDFQISGTYP VLPEENDFSS
FTRTILDKAP DAIVIIMYDT RQIPLIRNIS EAGYRGQVLL TESSCLENLE KEETDALSRF
PLFTISAYTN LVPGDHSDRF VQSYQEAFGN DPSKTLAGYG YDSMMLIADA FRNGNGEENI
TAEMIKEGLD NSRYYGVTGP KIFDMNHAPT SAMDRWGFKD GRFELMTISL V
|
|---|
| |