Gene Mhun_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0478 
Symbol 
ID3923119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp552784 
End bp553770 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content36% 
IMG OID637896118 
Producttransposase, IS4 
Protein accessionYP_501959 
Protein GI88601781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.616853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTATAA CGAAGCAGCC TTCAGATGTA GATTATATCA ATTACCTCAT CGCAGCTCGA 
TGCGACGTTT CTTGTGTAAA AGTCGCTGAT TGTTATTCGA CGTCTGAATT CTCGATATCA
CATGATACCT TCAATCGATT CCTAACAAGA CAGTCTCTAA CTCCTGAGAC GTTGTGGGCT
GAAGTTGAGG CATATGTTGA CAGAAAAAGG GGCTGGTTGG TTCTGGATGA CACTATTCTA
GATAAAAAAC ATTCCAAAAA AATCGAATGT ACATATTACC AGTGGAGTGG AAAAGAGCAC
AAAGTAATCA AAGGAATAGG ATTGATTGCC TTAATTTGGA CAGATGGAAT CACTTCATTT
CCAATTGATT ATCGAATTTA TGATAAGGAT GTTGATGATA AGACCAAAAA TGATCATCTC
CAAGAAATGG CCTTGACAGC TTTCAAAAGA GGATTTACTC CTGCCTTTGT CATGTTTGAT
AGTTGGTATT CCGGAAATGA AAATTTGAAG TTGATTAACC GTCTTGGATG GTTTTATTTC
ACACGAGTTA AGAAAAATCG TATGGTCAAT CCCGATGCCA AAGGTAATGT TCAAGTGTCA
TCATTAAATA TACCAGAGGA GGGATTAGAA GTCCATTTAA AGAAATATGG ATTTATTCGT
CTTTTTCACT CACTAAATCG TAAAGGTGTA AGTAGATATT GGGCAACCAA TTTTTTGCCG
ATGAATAATG AAGATAGGCT GGTTTTACAA TCTATTTGCT GGACAATCGA GAATTATCAT
AGGGCTATCA AAGAACTATG TGGTGTCGAA AAATGCCAAG CTAGAAAGGG AATTATCCAA
CGAAATCATA TTAATTGCTC ACTTCGGGCA TATTTACGAT TCGAAGTCAA TAAATTTTTG
AATGGTGTTA CTCCGTACGA TGCTCAATGG CAAATCATAA AAGTTGGAAT TTCAGAATAT
ATTCAGAACC CAAAATATGC GCTATAA
 
Protein sequence
MPITKQPSDV DYINYLIAAR CDVSCVKVAD CYSTSEFSIS HDTFNRFLTR QSLTPETLWA 
EVEAYVDRKR GWLVLDDTIL DKKHSKKIEC TYYQWSGKEH KVIKGIGLIA LIWTDGITSF
PIDYRIYDKD VDDKTKNDHL QEMALTAFKR GFTPAFVMFD SWYSGNENLK LINRLGWFYF
TRVKKNRMVN PDAKGNVQVS SLNIPEEGLE VHLKKYGFIR LFHSLNRKGV SRYWATNFLP
MNNEDRLVLQ SICWTIENYH RAIKELCGVE KCQARKGIIQ RNHINCSLRA YLRFEVNKFL
NGVTPYDAQW QIIKVGISEY IQNPKYAL