Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0437 |
Symbol | |
ID | 3924664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 507805 |
End bp | 509688 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637896076 |
Product | hypothetical protein |
Protein accession | YP_501918 |
Protein GI | 88601740 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.262278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGA TGCAGGGGAT GAGTGGACTT GACCTCATCA CCGTAACAGA CGAGATCACA CGGCTCCTCC CCCTCTGGGT GCATAAAGTG TACTTAGATG AGAACCGTCT CTGTATCTTC AGACTGAATA GTAAAAACCA GGGAAAGGTA AATATCCTTA TTGAACCAGG AAGGCGGTTC CATTGTGTAT CAACACTTCC CGAGATGCCA CAGATCCCCC CGGCATTTGC GATGTTTCTC AGAAAATATC TTGCCGGCGG GAGGGTTGAC GGTATACGTC AGCAGGGGTT GCAGCGGACA GTCATAATCG ATATCAGAAA GTCCGAGCAG CTGTTCCATC TCATTGTTGA GGTCTTTGAT GATGGAAATA TCATTCTGTG CGGGGAGGAT ATGACCATCA TCCAGCCGCT CACCCGGCAC CGGTTTAAGG ATCGTGATGT ACTCCCCGGG GCTGTATATG TCTTTGGACA GCCGGATGTC AGTTCCATAC CCGTAGAGGA GTTTGCTGAG CGGTTGTCCA CCGATGACCG GGATATTGTC AGGTCCCTGG CCGTCGGTTC ATTCCTTGGT GGTCGGTATG CAGAATACAT CCTCTCTGTT ACCGGGATAG ATAAAAAAAC GCTTGCAAAA GAGGCTGATG CTCCGGCACT TTATACTGCG ATCCATAACC TCCTTGAAAA AGCCAGAACT TCTCCGACCC CGGTCCTTGA TAAAAACGGA TGTCATCCGA TTCCTGTCGG TGATGAAAAA CCCGGTTCTT TTGACTCCTT TAATGCGGCC CTTGCTGCAT TCTACCCGGT TGCACCTCCG GTAAAGAAAC AGGAGGAGAA GATACGGGTA TCCCGTGAGG ACCGGATCCG TCATCAGCAG GAAGAGGCTA TTGTAAAGTT TGAGAAGAAT ATCACCCGGA ATGAGGAGCT TGCCGCTCTC CTCTATGAAG AGTACGGCTT TGTATCTGAA ATTATTACAA CACTATCAAA GGCTGCAGAG ACTCGTTCAT GGCAGGAAAT TGAAGCCATA TTAAAGAAGG ATACGAGCGG TGCAGGAAAG AAAATAATCA GGATATTCCC TGCAGAGGCA GCAGTTGAAC TCGACCTTGG TCGTCCGGTG AAGGTTTTTG TCCACGAAAC CATTGACCAG AATGCCGGCA GGTACTATGA TCAGGTCAAA AAGTTCAAGA AGAAACTTGC CGGGGCAAAA GCGGCTATGG AACGTGAGGT GCAGCAGGCA CGAACCAGGA AAGTGCAATA CCAGCGGCCG AAGAAGCGGT GGTTTGACCG GTTCAGATGG TTTTATACAT CAGATCAGGT TCTGGTCATT GGCGGCCGGG ATGCCGGGCA GAATGAAGAA CTGATCAGGA AGTACTTGGA GGGTGGTGAC ACCTTTGTCC ATGCTGATGT TCATGGAGCC AGTGTGGTTG TAGTAAAGGG AAAAACGAAA GATATGGATG AGGTGGCACG GTTTGCAGCG GCATATTCAG GTGCATGGCG GGCCGGGTTT GCATCCGCTG ATGTGTATGC GGCACGGCCT GATCAGGTAT CAAAGACTGC AGAGTCAGGT GAATACCTCT CCAGAGGTTC GTTCGTGGTC AGGGGAGAAC GACAATGGTT CCACGATGTC CCGCTTGAGG TAGTTATCGG CCTTCAGAAG GCCCCCCAGA CCCGGATTCT CGGAGGTCCG GCATCAGCGG TTACAAAATC CTGTGACCTT TTCGTGACCC TTCGTCCGGG AACATTTGAG CCCAATGATA TCGCAAAAAA GGTTGTTCGT GCTCTTCGTG AGAAACTATC TGCAGATGAA CAGAAGGCAC TTAAATTTGC GCTCAATACC GAAGCGGTCG CTGCTTTTGT CCCGCCCGGA GGATCTGATC TGGTGGAAGG ATGA
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Protein sequence | MATMQGMSGL DLITVTDEIT RLLPLWVHKV YLDENRLCIF RLNSKNQGKV NILIEPGRRF HCVSTLPEMP QIPPAFAMFL RKYLAGGRVD GIRQQGLQRT VIIDIRKSEQ LFHLIVEVFD DGNIILCGED MTIIQPLTRH RFKDRDVLPG AVYVFGQPDV SSIPVEEFAE RLSTDDRDIV RSLAVGSFLG GRYAEYILSV TGIDKKTLAK EADAPALYTA IHNLLEKART SPTPVLDKNG CHPIPVGDEK PGSFDSFNAA LAAFYPVAPP VKKQEEKIRV SREDRIRHQQ EEAIVKFEKN ITRNEELAAL LYEEYGFVSE IITTLSKAAE TRSWQEIEAI LKKDTSGAGK KIIRIFPAEA AVELDLGRPV KVFVHETIDQ NAGRYYDQVK KFKKKLAGAK AAMEREVQQA RTRKVQYQRP KKRWFDRFRW FYTSDQVLVI GGRDAGQNEE LIRKYLEGGD TFVHADVHGA SVVVVKGKTK DMDEVARFAA AYSGAWRAGF ASADVYAARP DQVSKTAESG EYLSRGSFVV RGERQWFHDV PLEVVIGLQK APQTRILGGP ASAVTKSCDL FVTLRPGTFE PNDIAKKVVR ALREKLSADE QKALKFALNT EAVAAFVPPG GSDLVEG
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