| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0410 |
|---|
| Symbol | |
|---|
| ID | 3924012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 454346 |
|---|
| End bp | 456064 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637896052 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_501894 |
|---|
| Protein GI | 88601716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.414748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0533426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA ATATCCCCTA TGGAATAATG AATTTTGCCG AATTAATTCT GGAAGACCGT
TATTTCATTG ATAAAACACA ATATATATCA GAATTGGAGC TAATAAAAAA CCCCATTTTC
TTACGGCCAA GAAGGTTTGG AAAATCACTC TTCTGTTCAA TGCTCAAGTA TTATTATGAT
ATTAAAGAGA AAGATAATTT TGAAAAATAT TTCAGCCATA CCTGGATTGG ACAGCATCCC
ACTCATAACC ATAACAAGTA TATTATTTTA CACCTGGATT TTTCTAGAGT TGAACCTGAA
AATTCAATAG AGAAAATTGA GCATAATTTT AAACAATACT GCAATAACCT GCTCATATTA
CTTCAAAAGT CTTATTCAGG AGTCTTGGGA TCAGCTCCGG ATCTTCCCGT AGATAATCCA
GCCTCTACAA ACCTTGGGAT ATGGCTGGAT GCAATTCAAT TATCCGGTGG CCCACCGGTT
TATGTAATTA TTGATGAATA TGATAATTTT GTCAACCATT TCATTACCAG TCATCAGGAT
CATCTGTATA AGGACATTAC ATCAACTGAA AGTTTTTTCA GGAGTTTTTT TAAAGTTCTT
AAAAATGGAA GACAAACCGG GTCTATCGCA AATCTCTTCA TCACCGGTGT ATTGCCCATT
ACTATTGATG ATCTCACCTC TAGTTATAAT ATTGGAACAT TTCTTACACT GGACCCATCC
TTTGAACACA TGCTTGGATT TACCCAGACA GAAGTTGATC AACTTCTGGA TTTTATATAT
AGAGACTATG GAATGGATTT TTCCACTCGA AAACAGGTAA ATGAAGTTAT TAAAAGTCAG
TATAACGGGT ATCATTTTGT TCATACCAAT TCTGATGCCT TATATAACCC AACAATGCTC
ATGTTCTTCC TTCGGGAATT CTGTGATCAA AAAATAATTC CAAAAAACCT TACGGATCTG
AACCTTCGAA CAGATCTGTC ATGGGTTAAG CGGATTACCA ACCAACCTGA GAATACTGAA
GAGATTCTCA CCGACATTCT CAAAACCAAT ACTATACCCT ATGATGAGGA ATACCTCATT
TCGAAATTTA ACAAATCCCA GTTCTTTAAT AAAAATTACT ATCCAATCTC ATTATTTTAC
CTTGGGATGC TCACCAGAAA AGATGATTTT TCCCTTGAAC TGCCCAATCT CTCCATGAGG
AAGATCTTTA CAGAATATTA CAACGAACTC CTTCATATCG ATGTATCTAC CCGGTATGCA
TCCATGATGC AGGACTTTAT CGATAATCCT GATTTGGAGA GGCTCTTTTC TAATTATTGG
GATCTATATA TCAGACAGTT TCCTGAAGCA GTCTTCACTC AGGTCAATGA GAATTTTTAC
CGCACGACTT TTTATGAACT CTGCAGCAGA TATCTCTCAA ACTGGTTTAT CTGGAACATT
GAGCGATCAT ATCCTCAGGG AAGATCTGAT CTTGAGTTCG TGGGAAAATA TCATGAACGG
TTTGCGAACC TCCGCTGGGT GATTGAATTC AAATACTTTT CCAATACTGA ATTCTCAAAA
ATGAAGTGCA AAATCGAAGA TATCCCCTTG AAAGAAGAAG ATACCAGACA GATTCAGGGG
TATGCACAAG GCCTCATGCA GGAATATCCA GAAGCATCAA TCCGACTTTT TGTCATATAT
TGTATCGGGA ACCAGGGCTT TCGGGTATTT GAAGTTTAA
|
|---|
| Protein sequence | MQKNIPYGIM NFAELILEDR YFIDKTQYIS ELELIKNPIF LRPRRFGKSL FCSMLKYYYD
IKEKDNFEKY FSHTWIGQHP THNHNKYIIL HLDFSRVEPE NSIEKIEHNF KQYCNNLLIL
LQKSYSGVLG SAPDLPVDNP ASTNLGIWLD AIQLSGGPPV YVIIDEYDNF VNHFITSHQD
HLYKDITSTE SFFRSFFKVL KNGRQTGSIA NLFITGVLPI TIDDLTSSYN IGTFLTLDPS
FEHMLGFTQT EVDQLLDFIY RDYGMDFSTR KQVNEVIKSQ YNGYHFVHTN SDALYNPTML
MFFLREFCDQ KIIPKNLTDL NLRTDLSWVK RITNQPENTE EILTDILKTN TIPYDEEYLI
SKFNKSQFFN KNYYPISLFY LGMLTRKDDF SLELPNLSMR KIFTEYYNEL LHIDVSTRYA
SMMQDFIDNP DLERLFSNYW DLYIRQFPEA VFTQVNENFY RTTFYELCSR YLSNWFIWNI
ERSYPQGRSD LEFVGKYHER FANLRWVIEF KYFSNTEFSK MKCKIEDIPL KEEDTRQIQG
YAQGLMQEYP EASIRLFVIY CIGNQGFRVF EV
|
|---|
| |