Gene Mhun_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0351 
Symbol 
ID3922264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp396781 
End bp397440 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID637895997 
Producthypothetical protein 
Protein accessionYP_501840 
Protein GI88601662 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.507736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTTC ATGGTCATTG TTATGGAATG GAAGATCTGA GAACTGATGT ACAGCGCACC 
CCATCTGACA AGATACTGAC CGATCCACCC TTTTATCTTC CTGAATTCGA GGCATCCTAC
CGGTACATCA TTGATGTGTA TGAGGTGCCC CCTCGTGACA TTGCCATATT TATCCCCTGT
GCGGTTCGAA AACCATACAG TACCAGTCCG AGTCACCGGA TCATGCGAGC TATCATCGAT
AAGGTTCTGC AGCCGGATTC ATTTCATCTC GTGATCTTTG GAACCTGTGG TATCCTTCCT
GCAGAACTGG AGACCATGTA CCCCTACGCT CATTATCAGT ACATGCTGGG AAAAGTGAAG
GATCCATCTA TACAGGAGGA TTTTCTCAGG ATTGAAACCG ATCGGGTGGC CGGGTATCTT
CAAAAAACAA AAGATACGTA TAAAAAACGG ATTGCCTATT GTATTGGTCC GTTTCGGAGG
GCGTTAATCC AGGGATCCGA ACTGGCAGGA GTCCCTATTG ATATCATCAT GCCAGGAAAG
GATGTAATTA ATAAAATAAT GGAACTTGAC TGTCCTTTCC AAGAAGGAAG TCTGAATATG
GAAGAATATC TTGAAGAGTT CTATAAAGGT CTTGTTTTGA TTCGAGACTC ATTATTGTGA
 
Protein sequence
MHFHGHCYGM EDLRTDVQRT PSDKILTDPP FYLPEFEASY RYIIDVYEVP PRDIAIFIPC 
AVRKPYSTSP SHRIMRAIID KVLQPDSFHL VIFGTCGILP AELETMYPYA HYQYMLGKVK
DPSIQEDFLR IETDRVAGYL QKTKDTYKKR IAYCIGPFRR ALIQGSELAG VPIDIIMPGK
DVINKIMELD CPFQEGSLNM EEYLEEFYKG LVLIRDSLL