| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0330 |
|---|
| Symbol | |
|---|
| ID | 3923697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 370409 |
|---|
| End bp | 371146 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637895976 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_501819 |
|---|
| Protein GI | 88601641 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.581333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.813664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATG TGAAGTGTGT CTCCAAATCT TTTGGCGGAC TACAGGCGGT CCGCAATGTG
GACATGACAC TCAGGGAGGG AGAGATCCTT GGGCTGGTCG GGCCGAACGG GGCTGGAAAA
ACCACACTCC TGAATATGAT ATCCGGAGTC TGCCGACCGG ATGCCGGAGG AATTTATTTC
GAAGAGGAGA ATATCACCCG GCTCACTCTG GATGCCATAT GTAAGAGAGG TATTGCAAAA
ACATTTCAGC ACCCGCGTTC TTTTCCAGGT CTTTCCGCAA AGGAAGGAGT ACTGATCAGT
GCTCTCTATG GAAACGGGCA TAAACCCGGT ATGAAGCAGG CCCAGGTGGA AGCAATTGAA
TGTCTGCAGC GTGTTGGATT TCCGGATGAA AAACTGGACT GCCCGCTTGG TACCCTCAAT
ACCATCGACC TTCGCAAGAC ACAACTGGCC CGTGCCCTGG CATCAAAACC AAAAATGCTC
CTTCTTGATG AGATTATGAC CGGCCTAACT CCAAGCGAAG GGAAAGAGGC CATCAAATTG
ATCCGGTCCC TTCGAGATGA GGGATTGACC ATTCTCATGA TCGAGCATGT GATGAAGATC
ATCATGGAAG TATCAGACCG TGTTGTTGTT CTGGATCAGG GTGAAAAGAT TGCTGAAGGG
ACTCCAAGAG AAGTCGCTGC AGATGAGCGA GTCATCGAGT CATACCTCGG AGAACAATAC
CACTTCCAGG AGCACTAA
|
|---|
| Protein sequence | MLNVKCVSKS FGGLQAVRNV DMTLREGEIL GLVGPNGAGK TTLLNMISGV CRPDAGGIYF
EEENITRLTL DAICKRGIAK TFQHPRSFPG LSAKEGVLIS ALYGNGHKPG MKQAQVEAIE
CLQRVGFPDE KLDCPLGTLN TIDLRKTQLA RALASKPKML LLDEIMTGLT PSEGKEAIKL
IRSLRDEGLT ILMIEHVMKI IMEVSDRVVV LDQGEKIAEG TPREVAADER VIESYLGEQY
HFQEH
|
|---|
| |