| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0253 |
|---|
| Symbol | |
|---|
| ID | 3925142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 278031 |
|---|
| End bp | 279266 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637895901 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_501744 |
|---|
| Protein GI | 88601566 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0159637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.716874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCGA CATCCAGATT ACGGCTCTCC CTGGGATTTG TTTCAACGGT CATGAGTATG
ATCTTTGGAA CAAATAAAGG GAGAAAAAAC CTTCTCAGCC CGGGAGCCAT TGAGATACTC
TACTCATCAT ATTTCTCCAG GATTTGTATG GGAGATATTG CCGGAATGCT TGAGATATCC
CCCAGCTCTG CTACAGACCT GGTCAATTAT CTTGAGCGGG AGGGGTATGT TAGACGCGTT
CCTGATACAG AGAACAGACG GAGTATTCAG GTGATACCTA CTGAAAAAGG TGAGGAATGG
ATCCTTTCTA CTGAAGAAAA GATCTATGGA TTTCTCGAAT CCGGTCTTTC CAGGTTGACA
CCTGATGAAC AAAAACAGTT TGCTGACCTC TGTACACGGT TTTCAGGCGT ACATGATACT
GCCAGTTTCA CCTCATCACT GAGAACATTC CGGGAAACAG GAAGTCAGAA TCGGATCTCG
CTCATCCAAA GACGAAACGG CAGACTGCTC AGGTTGGAAG AAGTTGTTGA TGGACGATAT
GCACATTCAC ATGAAACAGA CATAAAAGAG GAACAAATGA CATTAAAACC CAGAATACCA
GAAACATCAG AAGGAATACA AGATGAAATT ACCGTAGAGC AGTATGACCA TATGCAAAGA
GGGCTTCGGG ATAACGGGCA TCTCCCGGTT GAGGAACTGA TCCGGGCGTC AAAACCAGGA
GATAGTGCTC TTGAAATTGG TCCTGGACCC GGGTACTTTG GTCTAGAATG GCTGAAACAT
ACAAAAAAAA CTCACCTGAC CGGCCTTGAG ATAAGTCCTG CCATGATTCG TATGGCAGAG
AAGAACAGCA AGGATTATGG TCTTTCTGAC CGTTCAATCT ATCATGAAGG AAATGCCCTC
TCTATGCCAT TTGCAGATAA TTCATTTGAT CTTGCGTTTT CAAACGGATC CCTGCATGAA
TGGGAAGATC CGGGAAAGGT TTTTTCAGAG ATATTCAGGG TCTTAAAACC AGGCGGGGAG
TTACGTGTGA GTGATCTCCG AAGGGATCTG TCACCAGAGA TCTACCAGTT CATGCTCGAT
AGTTGTAAGG GGCCGGAGAT CAAAAAAGGG TTTCAAACCT CAGTTCAGGC AGCGTATACA
AAAGAGGAGT TAGAGATCCT GTTACAGGAT ATCGGTTTTA CCTGGGTACA GGTTATCGCT
CACCCATATG GACTGGTTGC TGTGGGAAAA AAATAA
|
|---|
| Protein sequence | MDPTSRLRLS LGFVSTVMSM IFGTNKGRKN LLSPGAIEIL YSSYFSRICM GDIAGMLEIS
PSSATDLVNY LEREGYVRRV PDTENRRSIQ VIPTEKGEEW ILSTEEKIYG FLESGLSRLT
PDEQKQFADL CTRFSGVHDT ASFTSSLRTF RETGSQNRIS LIQRRNGRLL RLEEVVDGRY
AHSHETDIKE EQMTLKPRIP ETSEGIQDEI TVEQYDHMQR GLRDNGHLPV EELIRASKPG
DSALEIGPGP GYFGLEWLKH TKKTHLTGLE ISPAMIRMAE KNSKDYGLSD RSIYHEGNAL
SMPFADNSFD LAFSNGSLHE WEDPGKVFSE IFRVLKPGGE LRVSDLRRDL SPEIYQFMLD
SCKGPEIKKG FQTSVQAAYT KEELEILLQD IGFTWVQVIA HPYGLVAVGK K
|
|---|
| |