| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0205 |
|---|
| Symbol | |
|---|
| ID | 3923574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 230309 |
|---|
| End bp | 231268 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637895854 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
|---|
| Protein accession | YP_501697 |
|---|
| Protein GI | 88601519 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.313932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGA ATAACATTAT TGAGATCTCT GATCTTACTG TATCATTTAA AGGCGAGGGA
TATCTGCTCA CTGCAGTTGA TAATCTTTCG CTCTCCGTGA TACATGGTGA GACCCTTGCT
ATCATTGGGG AGAGCGGGAG TGGAAAGTCC GTCCTTGGTC TTGCTATACT AAGACTACTG
CCTGATACTG CTGCCATTTC AGGTTCAATT ATTTTTCAGA CCCAGGACAT CCTCACACTC
AGTGAAGGGA TGATGGAAAA GATCAGGGGA GGGAAAATTG CTTGGATCCC GCAAAATCCA
AAACTTGGGT TTAATCCCTC GATGAAGATC TGGAAACAGG TTTCTGAACC GATAGTTCTC
CACACAGATA GTTCATGGTC AGAAGCAAAG AAACAGGCGA TTAGACTTCT TCGTCAGTAC
AGTATCGTAC CTCCGGAGAA GTGGGCCGAG GAGTACCCCG TTGCATATAG TGGTGGAATG
CTCCAGCGGG CGATGCTTGC CATGGGAACC TCGACCATTC CATCGGTGTT AATAGCTGAC
GAACCAACAA AAGGGATTGA TGCGATTAAC AAAAAAGATG TCATTGAGAT GTTTAACACA
CAGAAAGAGA GGGGCATCAC CCAGATTATC ATCACCCATG ATCTTGATTT TGCTTCAGAG
GTTGCTGACC GGATAGCGGT GATGTACTGC GGGCAGATAG TGGAGCTCAC CAGTGTTGAA
AGGTTTTTTA CTACTCCACT TCACCCCTAT TCAGTAGGGC TAGTAAACTC ACTTCCTCAG
CGGGGATTAT CACCGATTCC CGGTACTTCT CCGGCAATGC ATGAAAAACA GGCGGGATGC
AGATTCAAGT CACGATGCTC TCTCTGTAGT AGGGTCTGCT CAGAAGAGAT CCCCCTTTTC
CCTGTTGGGT ATGACAATGT CAGGTGTATC CAGTATCATA ACCGGAACTG GGCTTGGTAA
|
|---|
| Protein sequence | MKMNNIIEIS DLTVSFKGEG YLLTAVDNLS LSVIHGETLA IIGESGSGKS VLGLAILRLL
PDTAAISGSI IFQTQDILTL SEGMMEKIRG GKIAWIPQNP KLGFNPSMKI WKQVSEPIVL
HTDSSWSEAK KQAIRLLRQY SIVPPEKWAE EYPVAYSGGM LQRAMLAMGT STIPSVLIAD
EPTKGIDAIN KKDVIEMFNT QKERGITQII ITHDLDFASE VADRIAVMYC GQIVELTSVE
RFFTTPLHPY SVGLVNSLPQ RGLSPIPGTS PAMHEKQAGC RFKSRCSLCS RVCSEEIPLF
PVGYDNVRCI QYHNRNWAW
|
|---|
| |