| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0192 |
|---|
| Symbol | |
|---|
| ID | 3923561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 217843 |
|---|
| End bp | 218772 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637895842 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
|---|
| Protein accession | YP_501685 |
|---|
| Protein GI | 88601507 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.26934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAGG TATCCAATTT AAAAACTTCA TTCAGAACAC CAGAAGGGAT TGTAAAGGCT
GTTGATTCTA TTGATTTATC CCTTCGGAAA GGAGAGAAAG TTGGCCTGAT TGGTGAGACT
GGTTGCGGAA AAACGGTATT TGGCATGTCT GTTGTTCGTC TGCTTCCTCA TAACACTTCA
ATCTCTGGAA AGGTATCATA TAAAGGAAAG GATCTCATGA CCGTTCCGGA GAGTCACATG
CAGAATATCC GGGGGAGTGA AATCTCATTT ATTCTTCAGA ATCCAAGTGT CTCATTAAAT
CCGCTCATGC GAGTCGGCGG GCAGATTGAG GAAGCAGTCC GGAAAGGAAA GAATCTTTCA
GCTCAGGAAT CCAGGAAAGA GACGTTACGC CTGCTCAAAG AAGTAAACTT TCAGGATCCT
GAATATATCA TGAACCGGTA TCCTCATGAA CTAAGTGGCG GAATGAAGCA GAGGGTGATG
ATAGCTATTG GCATTGCAAG TGAGCCAGAT CTGATCATTG CAGATGAACC GACAAAAGCC
CTTGATAAGG GGAATAAGAA GGAGATACTA AGTCTCCTCT CAGATACTGC AGAGAGAAGT
TCCATGATCA TGATCACCCA TGATCTGGCT GCTGCCTCAG AGTTATGTGA CCGGATCCTC
GTTATGTATG CCGGTGAGAT TGTTGAGGAT GGCCCCTGTG ATGAGATACT CTCTGATCCC
CTGCATCCGT ATACGATAGC ATTCATAAAG GCTCATCCAA AAAACGGGTG CAAGGCAATT
CCTGGAAGTA GTCCTTCACT CATTGATCTC CCCTCCGGAT GCAGGTTTCA CCCACGATGC
CCTGATGCCT GCGCCAAATG CAGAACGAAT CATCCCGATC TCTCAAATGG TCACTCACAT
CACAGGAAGA ACAGATGTCA TTGCCATTAA
|
|---|
| Protein sequence | MLQVSNLKTS FRTPEGIVKA VDSIDLSLRK GEKVGLIGET GCGKTVFGMS VVRLLPHNTS
ISGKVSYKGK DLMTVPESHM QNIRGSEISF ILQNPSVSLN PLMRVGGQIE EAVRKGKNLS
AQESRKETLR LLKEVNFQDP EYIMNRYPHE LSGGMKQRVM IAIGIASEPD LIIADEPTKA
LDKGNKKEIL SLLSDTAERS SMIMITHDLA AASELCDRIL VMYAGEIVED GPCDEILSDP
LHPYTIAFIK AHPKNGCKAI PGSSPSLIDL PSGCRFHPRC PDACAKCRTN HPDLSNGHSH
HRKNRCHCH
|
|---|
| |