| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0177 |
|---|
| Symbol | |
|---|
| ID | 3922620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 196905 |
|---|
| End bp | 197894 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637895828 |
|---|
| Product | daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| Protein accession | YP_501671 |
|---|
| Protein GI | 88601493 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0504097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA CATACCGTCA CAATCAATCC GTTCATGAAT ACCCACTGGT AACCCATTCC
CTCACCAAAG GATTTGGTGA TCTTCTGGCA GTAGATAACC TGACCCTTTC AGTCGGAACC
GAAATATTCG GTCTTGTCGG GCCGAACGGC TCCGGAAAAA CAACAACCGT TCTGATGCTG
ACAACCCTTC TTGACCCAGA CAGCGGAGAT GCGACCATCT GTGGATATGA CATCCGGAAA
AACCCCCGAA GGGTTCGGGA GTCCATTAGT TATGTTCCGC AGGATATGGC AGTCGATGTC
AGACTGAGTG GGAGGGAGAA TGTCATCATG TTTGCCGAAC TCTATGGCGT GAAAAATCCC
GTTGAACGAT CCAATGAGGT TCTGAAAATT CTTGATCTTT TGGACCGGGC AGATGAACGG
GCAAAGGTGT ATTCGGGAGG GATGAGAAGA CGTCTTGAAC TTGCCCAGGC TCTGGTGCAT
AACCCGAAGA TCCTGTTTCT TGATGAACCA ACCGTCGGCC TTGATGTTGC TGCCAGGAAA
AAGATCTGGG AGCACATCAG AACGCTTCGA AATGATGGGA TGACGGTCTT TGTCACAACC
CATTACATGG ATGAAGCAGA CCGGTACTGT GACCGGGTTG CCATCATTGA CCATGGCAGA
ATTCAGGCGG TTGATACCCC GGCAAGATTA AAAGGGATAA TTTCTCAGGA TATCATATCA
GTTTCTATAT CAGGGAAATT CACCGGTATT GATGTGCCGG GAGTGAGCTT TGCACATCAG
GAGGAAGATA CCCTCATATT TCATTGTGAA AACGGAGCAG CAGCACTCCC CCTGGTGAAA
GATGCCCTAA GCGATGCCGG AAATCAGGTT TTATCCATGT CAGTCAGGCA GCCGTCCCTT
GATGATGTAT TTCTTCATCT TGTAGGACCA GGGGAGGATA AAAGTCCGTT TAAATCAAGC
ACCTTCCGGA ATATGATGGG GAAACGATGA
|
|---|
| Protein sequence | MATTYRHNQS VHEYPLVTHS LTKGFGDLLA VDNLTLSVGT EIFGLVGPNG SGKTTTVLML
TTLLDPDSGD ATICGYDIRK NPRRVRESIS YVPQDMAVDV RLSGRENVIM FAELYGVKNP
VERSNEVLKI LDLLDRADER AKVYSGGMRR RLELAQALVH NPKILFLDEP TVGLDVAARK
KIWEHIRTLR NDGMTVFVTT HYMDEADRYC DRVAIIDHGR IQAVDTPARL KGIISQDIIS
VSISGKFTGI DVPGVSFAHQ EEDTLIFHCE NGAAALPLVK DALSDAGNQV LSMSVRQPSL
DDVFLHLVGP GEDKSPFKSS TFRNMMGKR
|
|---|
| |