Gene Mhun_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0160 
Symbol 
ID3925067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp177343 
End bp179532 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content40% 
IMG OID637895812 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_501655 
Protein GI88601477 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.401412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCT CCCTCTTTGC GCTATCCTTC TCATCAGATC CAATCTTCCA GTCAAAATTG 
CATTCATATC TGGAGCATGA AGGGATTCAT GTCGATACTC TCCTCATGAG AAGCGAAGCC
CTGAAAAATA TTCCATTTCA TCGGTATGAT GTGCTCATCG TAAATACGGA GAGTAGTGAC
CGATGTGATG ATGGGTTTGA TGAAATCCGA AGAAATAATC CAGATATTAT TATAATTACA
TTTTCATCTG ATAATGTCGT GGTAGAAAAA AATCCAGGGA ATTTTAAGAA TTCCTGGTAT
TTTCATATTA AAACAGATAA AAACCAGCTT CTTTTTGAAG ATCTTATTCA CACCATCTAC
CATGGTGTTA TTCAGCGGGG ATTTATGCAC CTGCAGGGAG AGGTATCTGA TCTATTTTCT
CTCGTACAAG GCATTTCTGA CCCATTTTTT ATAATGGACA ATAAAAGGGA GGTTCACATC
TGGAATAAAG GGATGGTGAA TCTGACGGGG TATTCTGCTT TTCAGATTCT CGGCAAAGAC
CAAAATGTGC ATTCACTTCC GTTTTTCAAA AATTATGAAC CAATTCTGAT AGACTTATTG
GTGGATTATC ATAATGCCGT CAGGAATCAG TATGAACCTC TCATCTCCAT CGGAAATATT
TGGGTCATCA ATGATTATTT TCCGCATCTT AACGATGGAA AGGGCGCTCA TCTCCGGCTG
TATGCTTCAC CATTGTATGA TCAGTCGGGA GGGTTGCGTG GAGCGATTAT GTCTGCACAA
GATATTTCAT TCGTTATCGG CTTTCCTGGG TATTCGTCTG GAGCCCCTCA TCACAGATCC
CCGCTTCAAA AAGAGATTAC TCCCTGTAAT TATTCAAATA TGATTATAAA TGGTTTTGTT
CGGAAAAATA TTGAGAAGAA GACGTTATCA CCCGTATATG ATCTGTCAGA GAACAATAAT
GACAGAATCA ATTCATTCGA TGATACAGAA ATATCTGATT TTATATTCTT TTTTTACCGG
TTTGTGGAGA CTGCACATAT TCCTATCATT GGCTGGGATG CATCATATGC AATAACGCTC
TTTAATCTTG GTGCTGCCAG ACTTACCGGA ATTTCTTCTG ATAAAGTACT CGGCCAGAAA
ATCTTTACGT TGTTTCCTGA CAGTCAGAGA GATCGATCAC TGAGCCTGAT TCAGCAGGTC
CATGGACCTG AACCGGCTCT TCTCAGTGCC ATGATTCCCA TAGTCCAGAA ATCAGGAGAT
ATTCGGTCTG TTGTATGGAA TTTTGAGCGT TTTAACGGAC CAGACGGGGG GCCATTATTA
ATCATTGGGA TTGGACAGGA TATCACCGAA CAAGTCTGGG CGGTCGAATA TCTGAAAAAA
TATATTTCAG AACTGACTGA GAAGAATGAT GAGTTAAACC GGGTGAAAAG CCAGCTCTCT
GAAATTAATA AGCATCTGGA TGATATTGTT GAAAAACGGA CGAAAGAGAT TGAAGATCTA
TTAAAACAGA AGGATGAGTT CATCACCCAG ATAGGTCATG ATCTGAAAAC TTCCCTGACT
CCGGTAATTG CAATTCTTCC GGTATTAAGA AGAAAAGAGA GTGACCCAAA AAAGATTCAA
TATCTTGATA TGGCGATTCG GAATGCTGCA CAAATGCATG ATCTGCTGAT CAGTATTCTT
CAGATGGCTC GTCTGAATAA ATCATATCTC CCCGGTATCG GGACCTCTCT TCCGATTCGT
GAGATGATTC ATGAGTTGAC TGTAAATTTC GAATATGAGA TATTAAAAAA ACGTCTGATC
ATCACGAATG ATATTCCTGC GGATCTTGAA ATCAGAATGA GCCCGATCGA TTTTGATACT
ATCTTTGGAA ATCTCCTGGA TAATGCGATA AAATTTTCAA ATACCGGGGG GAGTATTACT
TTTCAGGGAG AACGAACTGA AAAGGGAATT ATTATCACAA TCAGGGACCA TGGTATTGGG
CTGCTTCCTG GAGAAGAAGA ACACATCTTC GAAAAATTCT ATAAAGCTGA CAGTTCACGA
CATGATGGAA AATCATACGG GCTTGGTCTT TCGATTACCC AGAAGATCGT TGAACGGAAC
GGAGGAATAA TTCAGGTAAA AAGCGATGGA CGGAATACCG GGACGACATT TACCCTGATA
TTCCCTCGTT TAAAAACCCT CCACTCATAA
 
Protein sequence
MIPSLFALSF SSDPIFQSKL HSYLEHEGIH VDTLLMRSEA LKNIPFHRYD VLIVNTESSD 
RCDDGFDEIR RNNPDIIIIT FSSDNVVVEK NPGNFKNSWY FHIKTDKNQL LFEDLIHTIY
HGVIQRGFMH LQGEVSDLFS LVQGISDPFF IMDNKREVHI WNKGMVNLTG YSAFQILGKD
QNVHSLPFFK NYEPILIDLL VDYHNAVRNQ YEPLISIGNI WVINDYFPHL NDGKGAHLRL
YASPLYDQSG GLRGAIMSAQ DISFVIGFPG YSSGAPHHRS PLQKEITPCN YSNMIINGFV
RKNIEKKTLS PVYDLSENNN DRINSFDDTE ISDFIFFFYR FVETAHIPII GWDASYAITL
FNLGAARLTG ISSDKVLGQK IFTLFPDSQR DRSLSLIQQV HGPEPALLSA MIPIVQKSGD
IRSVVWNFER FNGPDGGPLL IIGIGQDITE QVWAVEYLKK YISELTEKND ELNRVKSQLS
EINKHLDDIV EKRTKEIEDL LKQKDEFITQ IGHDLKTSLT PVIAILPVLR RKESDPKKIQ
YLDMAIRNAA QMHDLLISIL QMARLNKSYL PGIGTSLPIR EMIHELTVNF EYEILKKRLI
ITNDIPADLE IRMSPIDFDT IFGNLLDNAI KFSNTGGSIT FQGERTEKGI IITIRDHGIG
LLPGEEEHIF EKFYKADSSR HDGKSYGLGL SITQKIVERN GGIIQVKSDG RNTGTTFTLI
FPRLKTLHS