| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0075 |
|---|
| Symbol | |
|---|
| ID | 3922188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 95860 |
|---|
| End bp | 96720 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637895728 |
|---|
| Product | formate/nitrite transporter |
|---|
| Protein accession | YP_501572 |
|---|
| Protein GI | 88601394 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00341405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.480537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATC ATACCCCGTA TGAAATCATA GCAAAAGGTG CTGAGTCCGG GAAATACCGG
ATGTCACTTG AGGGATGGAA TATTCTGCTC AGGGGAGGGA TGGCCGGGGC ATATATTGCC
ATGGGTGCAT CACTGATGAT GATCGTATCG ACCGGTGTTG TACCTGCCCT CGGAACAGGA
ATAGCCCAGC TCCTTTCGGG CTTCGTATTT CCCCTCGGGC TTATCCTGAT TGTCCTGACC
GGTGCAGAAC TCTGTACCGG GGATGCAATG CTGGCACCTT TTGCTGCATT TTCCGGTCAG
GGCAGCTGGC TTTCTGTATT CAGATTATGG GGTCTGTCCT ATATCGGAAA TATTATCGGA
GCTCTCTTTT TCGCCGCCCT TGTGACCTTC GGAGTCCTCC TCCAGCCAGG TCCTGAGGGA
ATGACTGCTG GGGCATCTGC GGTAAACGTG GTAGCCTTTG CTTCAGAACG GTGCAGTTAT
CCTGGGCTTA TTGGGATATG GGCCTGTTTT ATCAAAGCAG TCGCAGCGGG CTGGCTCCTG
AACCTTGCCG TTCTCCTTGG TATCTGTGCC GATGATGCAA TAGGAAAGAT CGCCGGTGTA
TGGTTTCCTT CCATGGCCCT TGCATCAACC GGTCTTGAGC ATTCCATTAC CAATGCTGCT
CTTGTTCCTG CCGGGCTTTT ATGTGCACCT CATCTTACGT TCCTGCAGGT GGCACAGGTC
GGCCCGCTTG CGGGAAATCT TGGATGGAGT ATATTTATCT TCAGTAATCT CATCCCGGCA
ACAATAGGAA ATCTTCTGGG CGGTCTGGTT TTATCAGGAG TTCTTCTCTG GGTAGCATTT
AAAAAAGAGA TTGCACATTG A
|
|---|
| Protein sequence | MSYHTPYEII AKGAESGKYR MSLEGWNILL RGGMAGAYIA MGASLMMIVS TGVVPALGTG
IAQLLSGFVF PLGLILIVLT GAELCTGDAM LAPFAAFSGQ GSWLSVFRLW GLSYIGNIIG
ALFFAALVTF GVLLQPGPEG MTAGASAVNV VAFASERCSY PGLIGIWACF IKAVAAGWLL
NLAVLLGICA DDAIGKIAGV WFPSMALAST GLEHSITNAA LVPAGLLCAP HLTFLQVAQV
GPLAGNLGWS IFIFSNLIPA TIGNLLGGLV LSGVLLWVAF KKEIAH
|
|---|
| |