Gene Mhun_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0062 
Symbol 
ID3923125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp82520 
End bp82870 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content44% 
IMG OID637895715 
Productanti-sigma-factor antagonist domain-containing protein 
Protein accessionYP_501559 
Protein GI88601381 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0726506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATC ATCTTTCAAT ACAGGAACGT GAAATCTCCG GAATTACTAT TCTGGATATA 
TCCGGAAGAA TAGATGCTGC AACTTCATCA CAAATTGAAG GAGAGCTGGG AAAGAAGATT
GATACCGGGG TTACGACTCT TATCCTTAAC ATGAAGGATT TGAGTTATAT CAGCAGTTCT
GGGCTTCGGG TAATACTCGC AGCATTGAAG CGGGTCAAGG CCGAAGAAGG GACCATCGCA
CTCGCTACTC TACAGCCTGG TCCCGGAGAA GTTTTTAAAA TGACAGGATT TGACCGGCTC
TTTCCGATAA GTCCATCGGT TGAACAGGCA GTTGAAAAAC TCAAATCGTA A
 
Protein sequence
MEDHLSIQER EISGITILDI SGRIDAATSS QIEGELGKKI DTGVTTLILN MKDLSYISSS 
GLRVILAALK RVKAEEGTIA LATLQPGPGE VFKMTGFDRL FPISPSVEQA VEKLKS