| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0052 |
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| Symbol | |
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| ID | 3924866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 70504 |
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| End bp | 73164 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637895704 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_501549 |
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| Protein GI | 88601371 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.421691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGTC CTAAACGGAT CGGGAAGATC GAGTTTGGTC TCCTCTCCCC GAAAGAGATC
CGACAGATGA GTGTCAGAAA GATCATCTGG GCGGATACGT ACGACGATGA CGGGTTCCCC
TATCCCCAGG GTTTGATGGA TCTGCATCTG GGTGTGATTG ATCCTGGTCT CCGGTGCAAG
ACCTGCAGTC AGAAAGCAGG TGAGTGTCCC GGACACTTTG GTCACATCGA GCTGGCAAAG
CCGGTCATCC ACGTCGGGTA TACTCGGCTT ATTCGAAAAC TGCTTCGTGT TACCTGCAGA
GAGTGTGGCC GTCTGCTTCT GTCTGATGAA GAGATCGAGA AGATCATCGG ACCAGAAGAA
GAGATGGGAA GTGACTCGGT CAGTGAGAAG GATGTGAAGA AGGAGCGTAT CTGTCCGCAC
TGTGGTGAGC AGCAGCTGAA GATCAACTTT GAAAAGCCAA CCACATTTGC CGAGATCACG
ACCGACGAAC GGGGCAAAAA AGTAGAAAAT AAACTTACCC CGGCAGATAT CAGAGCACGT
CTTGAAAAGA TTCCTGATGA CGACCTGCAG AAACTGGGTA TTATAGGCAG CGTGGCACGT
CCTGAATGGA CTATTATGAC CGTGCTTCCG GTTCCCCCGG TCACCATGCG GCCATCCATT
ATTCTTGAGA ATGGTCAGCG TTCAGAGGAC GACCTGACGC ATAAACTGGT TGATATCATC
AGGATTAACC AGCGGTTCAA GGAAAACCAG GATGCAGGAG CACCCCAGCT GATCATTGAA
GATCTCTGGG AACTTCTCCA GTACCATGTG ACAACTTATA TCGACAACGA GGTCGCTGGA
TGTCCGCCAG CACGTCACCG GTCCGGCCGT CCGCTCAAGA CCCTCTCCCA GCGTCTGAAA
GGAAAAGACG GGCGTTTCAG AGGAAGTTTA TCTGGTAAGC GTGTGAACTT CTCATCCCGT
ACCGTTATCT CTCCGGATCC AAACCTCTCG GTCAATGAAG TGGGTATCCC CCAGAAGATT
GCGAATGAGA TGACCATTCC GGTTCAGGTC ACGGTTTTTA ATATAGATGA ACTCCGCCGG
ATTGTCAGGG TCGGACCTGA TCGGCCAAAC CTCAAATCCC CCTGTGGTGC AAACTATGTC
ATCAGGCCTG ACAAGCGTCG TATCCGTCTG GTAAAAGGTA CCGGGGCAGA TGACGGGAAC
CTTGACTTTG TTGCCGATCA GATAGACGTT GGATGGATTG TCGAGCGTCA TCTCCGTGAT
GGTGATATTG TGCTCTTTAA CCGACAGCCG TCCCTCCACC GGATGTCAAT TATGGCCCAC
TGGGTCCGGC TTATGGATGG CAAGACATTT CGTCTGAATC CGGCAGTCTG TCCCCCCTAT
AACGCGGATT TTGATGGGGA TGAGATGAAC CTGCACATCC CGCAGACCGA AGAGGCCAGG
GTTGAAGCAG CCATGCTCGC AGCAGTGCAG GAGAATATCC TGTCGCCCCG TTTTGGCGGA
CCGATCATCG GGGGTATCCA TGACCACATC TCCGGTATCT TCCTTCTGAC CCACACACTC
CGGTGGTTTA CGAAGGAAGA GACCATCGAT CTTCTCAAAA ATAACAAGAT TGATCGTCTC
GGTGAACCAG GGAAAGTAGA GGATGGCGTG AAATATTGGT CCAACAAGCA GATATTCTCA
AAGATCCTCC CGGCAGATCT GAACATGGTA TTCCGTGCAT CCTCCTGTAA GGGCTGTGAT
GAATGCCAGC GGGTTGATTG TGAACGTGAT GCATATGTGC AGATCATCGA TGGTGAGTTA
ATATCCGGTG TTATCGATAA AAAAGCGGTT GGTGCATTCG ATGGTGCAAT TCTCCACCGT
ATCATCAGAC AGTACGGATA TGAACGAGCT GCACGCTTCA TCGATGACAT GACCCGTCTT
TCGATTCGGG CAATTATGCA TGACGGGTTT ACCTTTGCTA TCGATGACGA AGATCTCTCC
AAGAGCGATT ATGGCCAGAT TCGTGAAGTT CTTGAACGTG CCGCCCAGGA TGTGGAGCGT
CGTATTCAGA TCTTTGAGGA TGGCCAGCTC GAACCCATGC CTGGCAGAAC TCCGGAAGAG
ACCCTTGAGA TGCAGATCAT GCAGGTTCTT GGAAAAGCTC GTGATAATAC GGGAGAGATT
GCAGGCAGAC ACCTTGGTCT GTCGAATTCT GCCGTGGTCA TGGCGGTCTC CGGTGCCAGA
GGTTCGATGC TGAACCTGAC CCAGATGGCC GGTTGTGTCG GTCAGCAGGC GGTTCGTGGT
GAGCGTATCA TGCGAGGGTA CGAGGATCGG ACCCTTCCCC ATTTCAAGAA ACATGACCGG
GGAGCAATGG CTCATGGGTT TGTCATGAAC AGTTACAAAT CCGGTCTGAA CCCGACTGAA
TTCTTCTTCC ATGCAATTGG AGGTCGTGAG GGTCTGGTGG ATACTGCGGT CCGTACATCC
CAGTCTGGTT ATCTCCAGCG GAGGATGATT AACGCTTTGC AGGACCTGAA AGTAGCCTAT
GATATGACCG TCAGAACCAC CGGAGGCAGA ATCATCCAGT TCGAATATGG TGAGGATTCT
ACCGATCCTA TGAAGAGTTC ATTTGGTGAA CCGGTGGATG TCGAAGGAAT TGTGAGTAAT
GTCCTCAAGG AGGAGATCTG A
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| Protein sequence | MPSPKRIGKI EFGLLSPKEI RQMSVRKIIW ADTYDDDGFP YPQGLMDLHL GVIDPGLRCK
TCSQKAGECP GHFGHIELAK PVIHVGYTRL IRKLLRVTCR ECGRLLLSDE EIEKIIGPEE
EMGSDSVSEK DVKKERICPH CGEQQLKINF EKPTTFAEIT TDERGKKVEN KLTPADIRAR
LEKIPDDDLQ KLGIIGSVAR PEWTIMTVLP VPPVTMRPSI ILENGQRSED DLTHKLVDII
RINQRFKENQ DAGAPQLIIE DLWELLQYHV TTYIDNEVAG CPPARHRSGR PLKTLSQRLK
GKDGRFRGSL SGKRVNFSSR TVISPDPNLS VNEVGIPQKI ANEMTIPVQV TVFNIDELRR
IVRVGPDRPN LKSPCGANYV IRPDKRRIRL VKGTGADDGN LDFVADQIDV GWIVERHLRD
GDIVLFNRQP SLHRMSIMAH WVRLMDGKTF RLNPAVCPPY NADFDGDEMN LHIPQTEEAR
VEAAMLAAVQ ENILSPRFGG PIIGGIHDHI SGIFLLTHTL RWFTKEETID LLKNNKIDRL
GEPGKVEDGV KYWSNKQIFS KILPADLNMV FRASSCKGCD ECQRVDCERD AYVQIIDGEL
ISGVIDKKAV GAFDGAILHR IIRQYGYERA ARFIDDMTRL SIRAIMHDGF TFAIDDEDLS
KSDYGQIREV LERAAQDVER RIQIFEDGQL EPMPGRTPEE TLEMQIMQVL GKARDNTGEI
AGRHLGLSNS AVVMAVSGAR GSMLNLTQMA GCVGQQAVRG ERIMRGYEDR TLPHFKKHDR
GAMAHGFVMN SYKSGLNPTE FFFHAIGGRE GLVDTAVRTS QSGYLQRRMI NALQDLKVAY
DMTVRTTGGR IIQFEYGEDS TDPMKSSFGE PVDVEGIVSN VLKEEI
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