| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0050 |
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| Symbol | |
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| ID | 3924864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 67113 |
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| End bp | 68669 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637895702 |
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| Product | DNA-directed RNA polymerase subunit beta'' |
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| Protein accession | YP_501547 |
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| Protein GI | 88601369 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.620898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGATT TAAGTATACT TTCTCAGGCT TACTTTTCCC GTGAACATGT AGCCCGTCAC
CAGCTGGACT CATACAATCA TTTTCTTCTC AACAATCTCC AGAAGGTCGT TGATGAGCAG
CGGGTAATTG AGACGGATAT TGAAACACGG GGGAAAGGGA ATGAACCGGT CTCTGTTGAA
CTTGGAGATC TGAAAATTTT AAAACCACTG GTCCGTGAAG CGGATGGTTC TCAGTCCGAA
CTCTATCCTG GTGAGGCACG GTTGCGAAAC ATCACCTATG CAGCACCGAT TCAGCTTGAC
CTGACTCTTG TTCAGGGAGG AGTCAGACAT GAGCCGGTGA CTGCAACTAT CGGACAATTA
CCGATCATGG TGGGCTCAGT TGCCTGCAAT CTGTATGGCA TGACAGATGA GGAGCGGACT
TCTCATGGAG AGGATCCCCT TGATCCGGGT GGCTATTTTA TTGTGAACGG TACTGAGCGT
GTGCTCATGA CGCTTGAAGA TCTTGCCTCA AACAAGATCA TGACAGAATA TACCGAGCGG
TACAATGAGC GTATCTACGT TGCCAAGGTG TTCTCCCAGT TTCGTGGGTA CCGTGCCCTG
GTCGTTGTAG AGCGGAACCG CAAAAACCTG CTTGAAGTTA CCTTCCCGTC GGTTGCCGGT
CATCTTCGGT TTGTTGATAT GATGCGGGCC CTTGGTATGA CCAGCGATGC TGATATCGTC
CGTGCTGTCT CAACCGATGA AGAGATCCTC ACGTTCATGA TGCAGAATCT TGAGGAGAGC
GAATGTGAGA CCGTTGAATG CGGTGTCATG TACGTCGGGA AGAAGCTGGC ACCCAACCAG
ACTCGCGATT ATCAGCGCAA ACGTGCAGAG TTTGTTCTTG ATAATTATCT TCTGCCACAC
CTCAATTACC TGATGCCCCG TACAGTGAAC GAAGAGGATG AAGAGTGTAT GAAAATTGTG
CATTCTGTCC GGCTTGCAAA GGCTCATTTC CTTGGCCGGA TGGCAGAGGC ATGTTTTGAT
CTGGTTCTTG ACCGGCGGCG TATTGATGAT AAGGATCATT ATGCAAACAA GAGGCTCAAA
CTGGCCGGTG ACTTAATGGA AGACCTCTTC CGTATCTCTC TGAACCGGCT GACCCGTGAT
GTCAAGTATC AGCTGGAACG TGCCAGCATG AGGCACCGCG ACCTCTCGAT CGCCACCGCA
GTCCGTGCAG ATGTGCTGAC TGAGCGTCTC CTTCATCCGC TTGCAACCGG TAACTGGGTC
GGAGGAAGAA CTGGTGTGTC ACAGCTGCTT GACCGCGTTG ATCACATGAG TGTCCTTTCA
CACTTACGCA GAGTCATATC TCCCCTCTCC CGTTCCCAGC CGCACTTCGA GGCTCGTGAT
CTCCACCCAA CCCAGTGGGG TCGTATCTGT CCAAGCGAAA CTCCTGAAGG ACCAAATTGT
GGTCTGGTGA AAAATTTTGC CCAGATGGTG GAGATTAGTA AAGGCGTCCA TTCAGATGAA
GAGATTATTC GGATGCTCTA TGGTATGGGT GTAGAGAGGA TAGGAGTTGA GATTTGA
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| Protein sequence | MIDLSILSQA YFSREHVARH QLDSYNHFLL NNLQKVVDEQ RVIETDIETR GKGNEPVSVE
LGDLKILKPL VREADGSQSE LYPGEARLRN ITYAAPIQLD LTLVQGGVRH EPVTATIGQL
PIMVGSVACN LYGMTDEERT SHGEDPLDPG GYFIVNGTER VLMTLEDLAS NKIMTEYTER
YNERIYVAKV FSQFRGYRAL VVVERNRKNL LEVTFPSVAG HLRFVDMMRA LGMTSDADIV
RAVSTDEEIL TFMMQNLEES ECETVECGVM YVGKKLAPNQ TRDYQRKRAE FVLDNYLLPH
LNYLMPRTVN EEDEECMKIV HSVRLAKAHF LGRMAEACFD LVLDRRRIDD KDHYANKRLK
LAGDLMEDLF RISLNRLTRD VKYQLERASM RHRDLSIATA VRADVLTERL LHPLATGNWV
GGRTGVSQLL DRVDHMSVLS HLRRVISPLS RSQPHFEARD LHPTQWGRIC PSETPEGPNC
GLVKNFAQMV EISKGVHSDE EIIRMLYGMG VERIGVEI
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