Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0030 |
Symbol | |
ID | 3923486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 47293 |
End bp | 47964 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637895681 |
Product | amino acid ABC transporter permease |
Protein accession | YP_501527 |
Protein GI | 88601349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.685158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTAT CCATTTTAAT CGACTGGTTT CCATATCTTT TCAGTGGAAT TGTACTGACA CTAGGTCTTG TCGCATCTGC CCTTATTATC GGGGCGGGAG TCGGACTTCC CCTGGCTCTG GGTCAGGTCT ATGGATCACT TCCTGTACGA TCTGCAATTG CAACGTTCGT ATGGTTTTTC AGAGGTCTTC CTGTCCTTGT TCTCCTATTT TTATTCTATT TTGGTATATT TCCTGCATTA GGACTGGATT TACCTGCATT CTATGTTGGA GCAGTAGTTC TGGGTTTGTG GGGTGCAGCA TATCAGTCAC AGGTATTCCG TGGAGCAATC CAGTCAATCT CCGAAGGTCA GATGATCGCT GCTCGTTCAC TGGGTATGTC ACGGTTTCAG GCAATCAAAA GCATTATTCT ACCCCAGGCC TTGAGAATTG CTCTTCCCGG ATGGTCGAAT CAGTATCCGG AGATATTAAC CGAGTCATCT GTCTGTTATG CAATCGGAGT AGCCGAGTTA CTCACCCGGT CATCACAAAT TGTCTCACAA ACCTACGTTA CCATGCCAAT TTACCTTGCC TGTGCTGTAA TTTTTATTCT GCTCAGTTAT GCGGGAACTT CATGCATTCA TATGGTCGAG AAGAAGATTG CAATACCAGG TTTCGGACCA GGAGGATCAT AA
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Protein sequence | MALSILIDWF PYLFSGIVLT LGLVASALII GAGVGLPLAL GQVYGSLPVR SAIATFVWFF RGLPVLVLLF LFYFGIFPAL GLDLPAFYVG AVVLGLWGAA YQSQVFRGAI QSISEGQMIA ARSLGMSRFQ AIKSIILPQA LRIALPGWSN QYPEILTESS VCYAIGVAEL LTRSSQIVSQ TYVTMPIYLA CAVIFILLSY AGTSCIHMVE KKIAIPGFGP GGS
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