Gene Mhun_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0030 
Symbol 
ID3923486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp47293 
End bp47964 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content45% 
IMG OID637895681 
Productamino acid ABC transporter permease 
Protein accessionYP_501527 
Protein GI88601349 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.685158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAT CCATTTTAAT CGACTGGTTT CCATATCTTT TCAGTGGAAT TGTACTGACA 
CTAGGTCTTG TCGCATCTGC CCTTATTATC GGGGCGGGAG TCGGACTTCC CCTGGCTCTG
GGTCAGGTCT ATGGATCACT TCCTGTACGA TCTGCAATTG CAACGTTCGT ATGGTTTTTC
AGAGGTCTTC CTGTCCTTGT TCTCCTATTT TTATTCTATT TTGGTATATT TCCTGCATTA
GGACTGGATT TACCTGCATT CTATGTTGGA GCAGTAGTTC TGGGTTTGTG GGGTGCAGCA
TATCAGTCAC AGGTATTCCG TGGAGCAATC CAGTCAATCT CCGAAGGTCA GATGATCGCT
GCTCGTTCAC TGGGTATGTC ACGGTTTCAG GCAATCAAAA GCATTATTCT ACCCCAGGCC
TTGAGAATTG CTCTTCCCGG ATGGTCGAAT CAGTATCCGG AGATATTAAC CGAGTCATCT
GTCTGTTATG CAATCGGAGT AGCCGAGTTA CTCACCCGGT CATCACAAAT TGTCTCACAA
ACCTACGTTA CCATGCCAAT TTACCTTGCC TGTGCTGTAA TTTTTATTCT GCTCAGTTAT
GCGGGAACTT CATGCATTCA TATGGTCGAG AAGAAGATTG CAATACCAGG TTTCGGACCA
GGAGGATCAT AA
 
Protein sequence
MALSILIDWF PYLFSGIVLT LGLVASALII GAGVGLPLAL GQVYGSLPVR SAIATFVWFF 
RGLPVLVLLF LFYFGIFPAL GLDLPAFYVG AVVLGLWGAA YQSQVFRGAI QSISEGQMIA
ARSLGMSRFQ AIKSIILPQA LRIALPGWSN QYPEILTESS VCYAIGVAEL LTRSSQIVSQ
TYVTMPIYLA CAVIFILLSY AGTSCIHMVE KKIAIPGFGP GGS